RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 ZSCAN31Q96LW9 406 aaPredicted RBP3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 NDC1Q9BTX1 674 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 STK31Q9BXU1 1019 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 MAGEB5Q9BZ81 275 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 GPR35Q9HC97 309 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 TMEM8AQ9HCN3 771 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 GCM1Q9NP62 436 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 NECTIN3Q9NQS3 549 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 ITM2CQ9NQX7 267 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 NTMQ9P121 344 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 PDP2Q9P2J9 529 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 NCDNQ9UBB6 729 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 ADAM29Q9UKF5 820 aa3.54□□□□□ -1.84
MTHFD1-212ENST00000555858 ZNF785A8K8V0 405 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TRIM38O00635 465 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 EPB41L2O43491 1005 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 RASSF9O75901 435 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 INMTO95050 263 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 NDST3O95803 873 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 CHEK2O96017 543 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 AMHP03971 560 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 A1BGP04217 495 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 CYP1A1P04798 512 aaPredicted RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 PTMAP06454 111 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 GRPP07492 148 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 IDEP14735 1019 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 IL1R2P27930 398 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 GABRB3P28472 473 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 COPAP53621 1224 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 UCP3P55916 312 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 GEMIN4P57678 1058 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 PSMC1P62191 440 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 DDX10Q13206 875 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 MRPL49Q13405 166 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 NFYCQ13952 458 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ACAP1Q15027 740 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TAF12Q16514 161 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ZNF568Q3ZCX4 644 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 AMOTQ4VCS5 1084 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ZMYM1Q5SVZ6 1142 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 INTS11Q5TA45 600 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 DCAF12L1Q5VU92 463 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 RRAGBQ5VZM2 374 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ARL6IP4Q66PJ3 421 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TANGO2Q6ICL3 276 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 JMJD6Q6NYC1 403 aaPredicted RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ZNF529Q6P280 563 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 USP17L6PQ6QN14 398 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 KRT28Q7Z3Y7 464 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 YAF2Q8IY57 180 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TMEFF1Q8IYR6 380 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 NME8Q8N427 588 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SLC15A4Q8N697 577 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 GLIS1Q8NBF1 620 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SLC35B2Q8TB61 432 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 IPO4Q8TEX9 1081 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 ZNF384Q8TF68 577 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 RABGGTAQ92696 567 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 USP13Q92995 863 aaPredicted RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SCAMP4Q969E2 229 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SPSB4Q96A44 273 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SKA1Q96BD8 255 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SNX27Q96L92 541 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SIGLEC10Q96LC7 697 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 PPM1MQ96MI6 270 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 GPHA2Q96T91 129 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 EIF2AK1Q9BQI3 630 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SPATA25Q9BR10 227 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SORBS1Q9BX66 1292 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 SIK2Q9H0K1 926 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 IL23AQ9NPF7 189 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TBC1D23Q9NUY8 699 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 USP40Q9NVE5 1235 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 RGL1Q9NZL6 768 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 FAM30AQ9NZY2 134 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 TMX2Q9Y320 296 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 IRAK3Q9Y616 596 aa3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 OAS3Q9Y6K5 1087 aaKnown RBP3.53□□□□□ -1.84
MTHFD1-212ENST00000555858 A0A0U1RQG5 324 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 PMS2P1A4D2B8 440 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 C9orf118A6NHY6 69 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 RRN3P2A6NIE6 340 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 AQP12BA6NM10 295 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 TMEM233B4DJY2 109 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 B5MCH6 92 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 J3KRW8 73 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 EIF3FO00303 357 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 POMCP01189 267 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 PYGLP06737 847 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 ITGA5P08648 1049 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 PIM1P11309 404 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 JUNBP17275 347 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 SLC6A4P31645 630 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 CASP2P42575 452 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 ZNF135P52742 658 aaPredicted RBP3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 WNT3P56703 355 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 CLRN1P58418 232 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 DLG4P78352 724 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 CAP1Q01518 475 aa3.52□□□□□ -1.85
MTHFD1-212ENST00000555858 DLX2Q07687 328 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms