RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 GOLGA8IPA6NC78 632 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 GOLGA8JA6NMD2 632 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 GALR2O43603 387 aaPredicted RBP26.43■■□□□ 1.82
PRKCH-216ENST00000555542 NPR3P17342 541 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 CEBPBP17676 345 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 PLD1Q13393 1074 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 PKP1Q13835 747 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 ATL3Q6DD88 541 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 BRSK2Q8IWQ3 736 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 ZNF560Q96MR9 790 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 CBWD1Q9BRT8 395 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 AVENQ9NQS1 362 aaPredicted RBP26.43■■□□□ 1.82
PRKCH-216ENST00000555542 GDE1Q9NZC3 331 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 YIPF1Q9Y548 306 aa26.43■■□□□ 1.82
PRKCH-216ENST00000555542 WDFY4Q6ZS81 3184 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 TSC2P49815 1807 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 KRBA1A5PL33 1030 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 CYB561D2O14569 222 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 POLR2DO15514 142 aaKnown RBP26.42■■□□□ 1.82
PRKCH-216ENST00000555542 AOC1P19801 751 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 GPR17Q13304 367 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 MYBPC2Q14324 1141 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 SV2CQ496J9 727 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 CACTINQ8WUQ7 758 aaKnown RBP26.42■■□□□ 1.82
PRKCH-216ENST00000555542 ATOH1Q92858 354 aaPredicted RBP26.42■■□□□ 1.82
PRKCH-216ENST00000555542 HPS3Q969F9 1004 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 RTP3Q9BQQ7 232 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 MAGEF1Q9HAY2 307 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 ASAH2Q9NR71 780 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 ARHGEF3Q9NR81 526 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 SLC2A4RGQ9NR83 387 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 PCDHA7Q9UN72 937 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 SCN1AP35498 2009 aa26.42■■□□□ 1.82
PRKCH-216ENST00000555542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.41■■□□□ 1.82
PRKCH-216ENST00000555542 H0Y858 1186 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 EXTL3O43909 919 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 MYL4P12829 197 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 ALDH1A3P47895 512 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 MRE11P49959 708 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 GPC5P78333 572 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 DNM1Q05193 864 aaKnown RBP26.41■■□□□ 1.82
PRKCH-216ENST00000555542 DUSP4Q13115 394 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 THEM5Q8N1Q8 247 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 ZSWIM2Q8NEG5 633 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 TBC1D17Q9HA65 648 aa26.41■■□□□ 1.82
PRKCH-216ENST00000555542 EPHB3P54753 998 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 PRSS36Q5K4E3 855 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 HS6ST3Q8IZP7 471 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 GPD1LQ8N335 351 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 LEMD2Q8NC56 503 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 TCEAL4Q96EI5 215 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 TMEM209Q96SK2 561 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 FAM86C1Q9NVL1 165 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 CEP72Q9P209 647 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 SLC27A5Q9Y2P5 690 aa26.4■■□□□ 1.82
PRKCH-216ENST00000555542 KPNA7A9QM74 516 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 KIAA0391O15091 583 aaKnown RBP26.39■■□□□ 1.82
PRKCH-216ENST00000555542 PI15O43692 258 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 CYP11A1P05108 521 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 PNPLA4P41247 253 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 FAM26FQ5R3K3 315 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 GLIS3Q8NEA6 775 aa26.39■■□□□ 1.82
PRKCH-216ENST00000555542 R3HCC1Q9Y3T6 440 aaKnown RBP26.39■■□□□ 1.82
PRKCH-216ENST00000555542 MTMR11A4FU01 709 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 ITGB3P05106 788 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 KRT19P08727 400 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 POLR2BP30876 1174 aaKnown RBP26.38■■□□□ 1.81
PRKCH-216ENST00000555542 WNT7BP56706 349 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 SLC39A12Q504Y0 691 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 CEP57L1Q8IYX8 460 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 ATAD1Q8NBU5 361 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 OR10T2Q8NGX3 314 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 SHDQ96IW2 340 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 PHOX2BQ99453 314 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 C7orf25Q9BPX7 421 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 BLZF1Q9H2G9 400 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 AGAP1Q9UPQ3 857 aa26.38■■□□□ 1.81
PRKCH-216ENST00000555542 EIF3DO15371 548 aaKnown RBP eCLIP26.37■■□□□ 1.81
PRKCH-216ENST00000555542 ECI2O75521 394 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 MICAL2O94851 1124 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 VNN2O95498 520 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 TMEM191BP0C7N4 346 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 CCR2P41597 374 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 PFKPQ01813 784 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 RESP18Q5W5W9 173 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 WSCD1Q658N2 575 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 CENPPQ6IPU0 288 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 CSGALNACT2Q8N6G5 542 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 FAM200AQ8TCP9 573 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 SEPT5Q99719 369 aaPredicted RBP26.37■■□□□ 1.81
PRKCH-216ENST00000555542 CRISPLD1Q9H336 500 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 SLITRK6Q9H5Y7 841 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 PDE11AQ9HCR9 933 aa26.37■■□□□ 1.81
PRKCH-216ENST00000555542 GJA1P17302 382 aa26.36■■□□□ 1.81
PRKCH-216ENST00000555542 AFMP43652 599 aa26.36■■□□□ 1.81
PRKCH-216ENST00000555542 BFSP1Q12934 665 aa26.36■■□□□ 1.81
PRKCH-216ENST00000555542 SNW1Q13573 536 aaKnown RBP26.36■■□□□ 1.81
PRKCH-216ENST00000555542 UNC13DQ70J99 1090 aa26.36■■□□□ 1.81
PRKCH-216ENST00000555542 ZCWPW1Q9H0M4 648 aa26.36■■□□□ 1.81
PRKCH-216ENST00000555542 ZFP14Q9HCL3 533 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms