RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 IGFLR1Q9H665 355 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TLR9Q9NR96 1032 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DMAC2Q9NW81 257 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ADAM28Q9UKQ2 775 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 XIRP2A4UGR9 3374 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 LGALS16A8MUM7 142 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PER2O15055 1255 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PHACTR2O75167 634 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 GYPCP04921 128 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 KRT13P13646 458 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 POLR2BP30876 1174 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 CASQ1P31415 396 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PSMC2P35998 433 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 LRRC63Q05C16 580 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 GOLGA8FQ08AF8 430 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 GOLGA8DPQ0D2H9 430 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 BIRC3Q13489 604 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PSMD6Q15008 389 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ZBTB6Q15916 424 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DUOXA2Q1HG44 320 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 CCDC40Q4G0X9 1142 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 FAM171A1Q5VUB5 890 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TCERG1LQ5VWI1 586 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 C9orf57Q5W0N0 161 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 FUT10Q6P4F1 479 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DCLRE1AQ6PJP8 1040 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 FOXR2Q6PJQ5 311 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TOGARAM2Q6ZUX3 1019 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 SLC9A9Q8IVB4 645 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ELMO3Q96BJ8 720 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 MRPL38Q96DV4 380 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 MFSD14AQ96MC6 490 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 FBXL18Q96ME1 805 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 UROC1Q96N76 676 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DUSP9Q99956 384 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 MTCH2Q9Y6C9 303 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 SPTBN5Q9NRC6 3674 aaKnown RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 C5orf42Q9H799 3197 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 HIDE1A8MVS5 230 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 EFCAB8A8MWE9 144 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 CASP14P31944 242 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 RPL9P32969 192 aaKnown RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 VAMP7P51809 220 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 CDR1P51861 262 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 BFSP1Q12934 665 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 CAMK1Q14012 370 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 SURF1Q15526 300 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 TTI2Q6NXR4 508 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 IRF2BP1Q8IU81 584 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 C1orf127Q8N9H9 656 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 RIN2Q8WYP3 895 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 CGRRF1Q99675 332 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 DERAQ9Y315 318 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 C2CD2Q9Y426 696 aa10.6□□□□□ -0.71
PSEN1-213ENST00000555386 TIMM13Q9Y5L4 95 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-213ENST00000555386 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.713e-6■■■■■ 80.4
PSEN1-213ENST00000555386 URODP06132 367 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 RPL17P18621 184 aaKnown RBP10.59□□□□□ -0.71
PSEN1-213ENST00000555386 CYP3A5P20815 502 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TKTP29401 623 aaKnown RBP10.59□□□□□ -0.71
PSEN1-213ENST00000555386 GCLMP48507 274 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 GNG11P61952 73 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TUBB4BP68371 445 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 UBXN1Q04323 297 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 MYBPC2Q14324 1141 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 BMS1Q14692 1282 aaKnown RBP10.59□□□□□ -0.71
PSEN1-213ENST00000555386 PTPN21Q16825 1174 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 USP41Q3LFD5 358 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TCEAL5Q5H9L2 206 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 PRSS55Q6UWB4 352 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-213ENST00000555386 CD300LGQ6UXG3 332 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 ADGRD2Q7Z7M1 963 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 WDR49Q8IV35 697 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 MNS1Q8NEH6 495 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 PARD3BQ8TEW8 1205 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 ZNF516Q92618 1163 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 NUP58Q9BVL2 599 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 VPS16Q9H269 839 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 ABHD10Q9NUJ1 306 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 TAB2Q9NYJ8 693 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 OGFRQ9NZT2 677 aa10.59□□□□□ -0.71
PSEN1-213ENST00000555386 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms