RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TNFSF9P41273 254 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 OSTNP61366 133 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 HTRA4P83105 476 aaPredicted RBP18.61■□□□□ 0.57
SHOX-204ENST00000554971 C2orf54Q08AI8 447 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 EMBQ6PCB8 327 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 HS2ST1Q7LGA3 356 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 SLC9A9Q8IVB4 645 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 THNSL1Q8IYQ7 743 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 GSTCDQ8NEC7 633 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 ZFP42Q96MM3 310 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 APOL6Q9BWW8 343 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 ADAMTS1Q9UHI8 967 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 MYO7AQ13402 2215 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 A0A0A6YYK5 440 aaPredicted RBP18.61■□□□□ 0.57
SHOX-204ENST00000554971 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 CCDC172P0C7W6 258 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 FERP16591 822 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 PBX2P40425 430 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 NNTQ13423 1086 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 CRELD2Q6UXH1 353 aaPredicted RBP18.61■□□□□ 0.57
SHOX-204ENST00000554971 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.61■□□□□ 0.57
SHOX-204ENST00000554971 POMGNT1Q8WZA1 660 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 MSTO1Q9BUK6 570 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 A0A1W2PPC1 479 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 CLIC2O15247 247 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 RECQL4O94761 1208 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 ARHGEF15O94989 841 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 SKIP12755 728 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 SLC9A1P19634 815 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 GRM5P41594 1212 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 JAM2P57087 298 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 PTK2Q05397 1052 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 HELQQ8TDG4 1101 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 PBX4Q9BYU1 374 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 PCIF1Q9H4Z3 704 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 DMAC2Q9NW81 257 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 STIM2Q9P246 746 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 VPS18Q9P253 973 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 HCSTQ9UBK5 93 aa18.6■□□□□ 0.57
SHOX-204ENST00000554971 AGO2Q9UKV8 859 aaKnown RBP18.6■□□□□ 0.57
SHOX-204ENST00000554971 PALMO75781 387 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 STAG3L1P0CL83 205 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 GARTP22102 1010 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 RFX1P22670 979 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHOX-204ENST00000554971 TNNT3P45378 269 aaPredicted RBP18.59■□□□□ 0.57
SHOX-204ENST00000554971 ACOT2P49753 483 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 EIF1ADQ8N9N8 165 aaKnown RBP18.59■□□□□ 0.57
SHOX-204ENST00000554971 SAAL1Q96ER3 474 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 PBKQ96KB5 322 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 CASD1Q96PB1 797 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 SELENOOQ9BVL4 669 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 KLK14Q9P0G3 267 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 LRFN2Q9ULH4 789 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 NENFQ9UMX5 172 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 ARL5CA6NH57 179 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 OGTO15294 1046 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 BUB1O43683 1085 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 ITGA4P13612 1032 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 MLH1P40692 756 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 STAT1P42224 750 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 SLFN12LQ6IEE8 588 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 SPRED2Q7Z698 418 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 IFT20Q8IY31 132 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 GAD1Q99259 594 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 LRRC1Q9BTT6 524 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 RSAD1Q9HA92 442 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 MIOSQ9NXC5 875 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 NAGPAQ9UK23 515 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 CPSF3Q9UKF6 684 aaKnown RBP18.59■□□□□ 0.57
SHOX-204ENST00000554971 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
SHOX-204ENST00000554971 YBX2Q9Y2T7 364 aaKnown RBP18.59■□□□□ 0.57
SHOX-204ENST00000554971 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 TLL1O43897 1013 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 LINC00271P0C7V0 271 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 SNRPFP62306 86 aaKnown RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 ENOX2Q16206 610 aaKnown RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 LRIT3Q3SXY7 679 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 DCAF17Q5H9S7 520 aaPredicted RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 C8orf74Q6P047 294 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 ALKAL1Q6UXT8 129 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 ZNF571Q7Z3V5 609 aaPredicted RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 TAF4BQ92750 862 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 CAVIN3Q969G5 261 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 CALR3Q96L12 384 aaKnown RBP18.58■□□□□ 0.56
SHOX-204ENST00000554971 RAD9AQ99638 391 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 SIX2Q9NPC8 291 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 HSPBP1Q9NZL4 362 aa18.58■□□□□ 0.56
SHOX-204ENST00000554971 GOLGA8IPA6NC78 632 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 GOLGA8JA6NMD2 632 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 PTGESO14684 152 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 INPPL1O15357 1258 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 B4GALT3O60512 393 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 CXCL8P10145 99 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 WNT7BP56706 349 aa18.57■□□□□ 0.56
SHOX-204ENST00000554971 SLC10A6Q3KNW5 377 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms