RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 U2AF2P26368 475 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CHMLP26374 656 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 RFC4P35249 363 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 MEOX1P50221 254 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 LACTBP83111 547 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 SSRP1Q08945 709 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 EIF2B5Q13144 721 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 SART3Q15020 963 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 POSTNQ15063 836 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 MTERF2Q49AM1 385 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PREPLQ4J6C6 727 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PARP10Q53GL7 1025 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 TEX35Q5T0J7 233 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 SGMS1Q86VZ5 419 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 LRRC49Q8IUZ0 686 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 ZC3H7AQ8IWR0 971 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CNTROBQ8N137 903 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 D2HGDHQ8N465 521 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 ZBTB38Q8NAP3 1195 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 FAM76AQ8TAV0 307 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 ASB15Q8WXK1 588 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 LARP4BQ92615 738 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 RSRC1Q96IZ7 334 aaKnown RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 UIMC1Q96RL1 719 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 BAG1Q99933 345 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 NACA2Q9H009 215 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 DDX21Q9NR30 783 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CEP72Q9P209 647 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 CTNNA3Q9UI47 895 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 TMEM98Q9Y2Y6 226 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 PAPPA2Q9BXP8 1791 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 EVC2Q86UK5 1308 aa4.95□□□□□ -1.62
ATXN3-227ENST00000554491 A0A087X1B8 175 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 TMEM110-MUSTN1A8MSY1 372 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SCDO00767 359 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 CTIFO43310 598 aaKnown RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 MTA2O94776 668 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 FAM153BP0C7A2 387 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 HOXC9P31274 260 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 MAN1A1P33908 653 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 EPHX2P34913 555 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 STAT3P40763 770 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 CLK1P49759 484 aaKnown RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 WASHC5Q12768 1159 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 GPS2Q13227 327 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 FAM47CQ5HY64 1035 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SFMBT2Q5VUG0 894 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 GRAMD4Q6IC98 578 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF627Q7L945 461 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 KRT77Q7Z794 578 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 LDLRAD3Q86YD5 345 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 NOSTRINQ8IVI9 506 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 CCDC65Q8IXS2 484 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 C10orf67Q8IYJ2 551 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 IQUBQ8NA54 791 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SLC17A8Q8NDX2 589 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SHCBP1Q8NEM2 672 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 WDR48Q8TAF3 677 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF483Q8TF39 744 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 THOC1Q96FV9 657 aaKnown RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 GPATCH3Q96I76 525 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 FAM81BQ96LP2 452 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 TRIM6Q9C030 488 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 LRRC27Q9C0I9 530 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 TAOK3Q9H2K8 898 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 NELFAQ9H3P2 528 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF703Q9H7S9 590 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 PANK3Q9H999 370 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 COMMD8Q9NX08 183 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 TMOD3Q9NYL9 352 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 GABBR1Q9UBS5 961 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SRP68Q9UHB9 627 aaKnown RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 HACL1Q9UJ83 578 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ACAD8Q9UKU7 415 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ASAP1Q9ULH1 1129 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ATP6V0A2Q9Y487 856 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 NCAPD2Q15021 1401 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 SOS1Q07889 1333 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 MYBBP1AQ9BQG0 1328 aaKnown RBP4.94□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF541Q9H0D2 1346 aa4.94□□□□□ -1.62
ATXN3-227ENST00000554491 LAMB4A4D0S4 1761 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 PRAMEF22A3QJZ6 481 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CAPN14A8MX76 684 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 GOLGA6L19H0YKK7 550 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 GSTA4O15217 222 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 HIP1RO75146 1068 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 ADH4P08319 380 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 GCFC2P16383 781 aaKnown RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 NF2P35240 595 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 MNAT1P51948 309 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 INHBCP55103 352 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SH3BGRP55822 239 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 GABREP78334 506 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 HHEXQ03014 270 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 RASGRF1Q13972 1273 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms