RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PDCP20941 246 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 MALP21145 153 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 BMP5P22003 454 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 SEC24CP53992 1094 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 SNAPC2Q13487 334 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 FLYWCH1Q4VC44 716 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 FUBP1Q96AE4 644 aaKnown RBP6.14□□□□□ -1.43
ATXN3-225ENST00000554214 GOLGA3Q08378 1498 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 RAPGEF6Q8TEU7 1601 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 ESRRBO95718 433 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 LMNAP02545 664 aaKnown RBP6.13□□□□□ -1.43
ATXN3-225ENST00000554214 CD1AP06126 327 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 SMARCA1P28370 1054 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 MPLP40238 635 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 ANAPC15P60006 121 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 EXOSC10Q01780 885 aaKnown RBP6.13□□□□□ -1.43
ATXN3-225ENST00000554214 ZBTB46Q86UZ6 589 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 COLGALT2Q8IYK4 626 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 CPA6Q8N4T0 437 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 Q8NA96 180 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 UBE2Q2Q8WVN8 375 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
ATXN3-225ENST00000554214 TLR10Q9BXR5 811 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 UNKLQ9H9P5 680 aaKnown RBP6.13□□□□□ -1.43
ATXN3-225ENST00000554214 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 ZNHIT2Q9UHR6 403 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 LUC7L2Q9Y383 392 aaKnown RBP6.13□□□□□ -1.43
ATXN3-225ENST00000554214 POGZQ7Z3K3 1410 aa6.13□□□□□ -1.43
ATXN3-225ENST00000554214 OVOL3O00110 214 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 MAST3O60307 1309 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 ZFPL1O95159 310 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 FDXRP22570 491 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 VAV2P52735 878 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 FHOD3Q2V2M9 1422 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 SLC44A3Q8N4M1 653 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 C3orf20Q8ND61 904 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-225ENST00000554214 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-225ENST00000554214 ARHGEF12Q9NZN5 1544 aa6.12□□□□□ -1.43
ATXN3-225ENST00000554214 C3P01024 1663 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 NUP153P49790 1475 aaKnown RBP6.11□□□□□ -1.43
ATXN3-225ENST00000554214 UHRF1BP1Q6BDS2 1440 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 LRRC14BA6NHZ5 514 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 F2RL2O00254 374 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 IL33O95760 270 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 NUDT3O95989 172 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 PLA2G5P39877 138 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 MPP3Q13368 585 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 ZNF365Q70YC5 407 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 DNAJC10Q8IXB1 793 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
ATXN3-225ENST00000554214 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 KLHL32Q96NJ5 620 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-225ENST00000554214 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 POLHQ9Y253 713 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
ATXN3-225ENST00000554214 MED1Q15648 1581 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-225ENST00000554214 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 ZMYM4Q5VZL5 1548 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 SCAPERQ9BY12 1400 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 POU2F2P09086 479 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 CYP2C19P33261 490 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 HSPA1LP34931 641 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 ADRA1BP35368 520 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
ATXN3-225ENST00000554214 IGBP1P78318 339 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 FPGSQ05932 587 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-225ENST00000554214 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 Q6ZNX1 250 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 USP45Q70EL2 814 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 SIDT1Q9NXL6 827 aaKnown RBP6.1□□□□□ -1.43
ATXN3-225ENST00000554214 DMTF1Q9Y222 760 aa6.1□□□□□ -1.43
ATXN3-225ENST00000554214 CDK13Q14004 1512 aaKnown RBP6.09□□□□□ -1.43
ATXN3-225ENST00000554214 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 CXCR5P32302 372 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 NEK2P51955 445 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 CCDC93Q567U6 631 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms