RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 GOLGA6AQ9NYA3 693 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 HOOK1Q9UJC3 728 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RWDD3Q9Y3V2 267 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MAFBQ9Y5Q3 323 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CHD9Q3L8U1 2897 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MYH6P13533 1939 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 REV3LO60673 3130 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 KDM3AQ9Y4C1 1321 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 BPTFQ12830 3046 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 A0A1W2PPC1 479 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 DCDC2BA2VCK2 349 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 HAS3O00219 553 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ACKR2O00590 384 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF263O14978 683 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SCAMP1O15126 338 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MDM4O15151 490 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 AXIN1O15169 862 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TOM1L1O75674 476 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GRAP2O75791 330 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 EYA4O95677 639 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CALCAP01258 141 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ATF7P17544 494 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SMARCA1P28370 1054 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GGCXP38435 758 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 IFNAR2P48551 515 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 DHPSP49366 369 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GPR15P49685 360 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 RAB27AP51159 221 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 VCPP55072 806 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NAP1L1P55209 391 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CDC42EP1Q00587 391 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 KDSRQ06136 332 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 FOXD4Q12950 439 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SRSF5Q13243 272 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PNOCQ13519 176 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GPNMBQ14956 572 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 KMT5BQ4FZB7 885 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TAF3Q5VWG9 929 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 BTBD8Q5XKL5 378 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 KIAA1211LQ6NV74 962 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF662Q6ZS27 426 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ACOT1Q86TX2 421 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PASD1Q8IV76 773 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ARID3BQ8IVW6 561 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CHPFQ8IZ52 775 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TTC9BQ8N6N2 239 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ARL14EPQ8N8R7 260 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 C12orf50Q8NA57 414 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZSWIM2Q8NEG5 633 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ETNPPLQ8TBG4 499 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 HMGB4Q8WW32 186 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 FGF13Q92913 245 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LENG9Q96B70 501 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PABPC5Q96DU9 382 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MTMR8Q96EF0 704 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MFSD14AQ96MC6 490 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ACCSQ96QU6 501 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM209Q96SK2 561 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TSG101Q99816 390 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 IFT122Q9HBG6 1241 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GKN1Q9NS71 199 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 AGPAT5Q9NUQ2 364 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 DPP3Q9NY33 737 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NAGPAQ9UK23 515 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SH3BP1Q9Y3L3 701 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNFX1Q9P2E3 1918 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PLIN4Q96Q06 1357 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NFASCO94856 1347 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 DLEC1Q9Y238 1755 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NAV3Q8IVL0 2385 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ESYT2A0FGR8 921 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MYMKA6NI61 221 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ANKRD63C9JTQ0 380 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 F8VP50 259 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM66O15016 1216 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SEC16AO15027 2179 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MBTPS2O43462 519 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 B4GALT3O60512 393 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 GPR32O75388 356 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LETM1O95202 739 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SLC4A1P02730 911 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 RB1P06400 928 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 RHOP08100 348 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZSCAN22P10073 491 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LCP1P13796 627 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NR2F2P24468 414 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TOB1P50616 345 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM9Q13443 819 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CUL4BQ13620 913 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TEAD2Q15562 447 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF699Q32M78 642 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGAP15Q53QZ3 475 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF667Q5HYK9 610 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MDH1BQ5I0G3 518 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 C10orf120Q5SQS8 335 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PARM1Q6UWI2 310 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MPZL3Q6UWV2 235 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LRRC55Q6ZSA7 311 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 RRAGAQ7L523 313 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF410Q86VK4 478 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms