RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 VWA8A3KMH1 1905 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 PPEF2O14830 753 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 SYN3O14994 580 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 LRRN2O75325 713 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 TADA2AO75478 443 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 TYMPP19971 482 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 ANXA13P27216 316 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 HNRNPH3P31942 346 aaKnown RBP15.51■□□□□ 0.07
SHMT2-210ENST00000553950 PDE6CP51160 858 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 BCAR1P56945 870 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 FAM117BQ6P1L5 589 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 VPS36Q86VN1 386 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 UNC93AQ86WB7 457 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 TATDN2Q93075 761 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 SENP8Q96LD8 212 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 KREMEN1Q96MU8 473 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 OXCT2Q9BYC2 517 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-210ENST00000553950 CISHQ9NSE2 258 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 CXXC1Q9P0U4 656 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-210ENST00000553950 BARX2Q9UMQ3 279 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-210ENST00000553950 PCDHB8Q9UN66 801 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 PRG3Q9Y2Y8 225 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-210ENST00000553950 PCDHB12Q9Y5F1 795 aa15.51■□□□□ 0.07
SHMT2-210ENST00000553950 M0QZQ0 153 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CYB561D2O14569 222 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 NRP1O14786 923 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CYP11A1P05108 521 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 GALTP07902 379 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 KRT5P13647 590 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 WARSP23381 471 aaKnown RBP15.5■□□□□ 0.07
SHMT2-210ENST00000553950 LHX1P48742 406 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 SLC11A1P49279 550 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CDK17Q00537 523 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 GJB7Q6PEY0 223 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 FAM71AQ8IYT1 594 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 TC2NQ8N9U0 490 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 SAMD11Q96NU1 681 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 GDF15Q99988 308 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 SNX25Q9H3E2 840 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CWH43Q9H720 699 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 SMYD3Q9H7B4 428 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHMT2-210ENST00000553950 DNAJB4Q9UDY4 337 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CNTN6Q9UQ52 1028 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
SHMT2-210ENST00000553950 CILPO75339 1184 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 SERPING1P05155 500 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PAEPP09466 180 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PCSK1P29120 753 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 BMP8BP34820 402 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 USP8P40818 1118 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PRKCIP41743 596 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 ADKP55263 362 aaKnown RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 APBA1Q02410 837 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PTK2Q05397 1052 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 STILQ15468 1287 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 MEA1Q16626 185 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 TDRD12Q587J7 1177 aaKnown RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 FUT10Q6P4F1 479 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 KCNT2Q6UVM3 1135 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 LIMS2Q7Z4I7 341 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 UBR7Q8N806 425 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 COLGALT1Q8NBJ5 622 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 C3orf58Q8NDZ4 430 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 CLP1Q92989 425 aaKnown RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 TRIM44Q96DX7 344 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 TNIP3Q96KP6 325 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 ARID3AQ99856 593 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PAAF1Q9BRP4 392 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 NT5C1AQ9BXI3 368 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 MRPL42Q9Y6G3 142 aaKnown RBP15.49■□□□□ 0.07
SHMT2-210ENST00000553950 PDE4DIPQ5VU43 2346 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 CEP290O15078 2479 aa15.49■□□□□ 0.07
SHMT2-210ENST00000553950 SPTLC1O15269 473 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 MED7O43513 233 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 B4GALT3O60512 393 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 CAPN15O75808 1086 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 GFPT2O94808 682 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 CD58P19256 250 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 ACO1P21399 889 aaKnown RBP15.48■□□□□ 0.07
SHMT2-210ENST00000553950 FECHP22830 423 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 KLHL30Q0D2K2 578 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 RAB30Q15771 203 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 SOWAHAQ2M3V2 549 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 TMEM270Q6UE05 265 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 CYP26C1Q6V0L0 522 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 THEM5Q8N1Q8 247 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 BAG1Q99933 345 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-210ENST00000553950 PLVAPQ9BX97 442 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 GPR88Q9GZN0 384 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms