RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ACVR2BQ13705 512 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 RTP5Q14D33 572 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ACAP1Q15027 740 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ST3GAL2Q16842 350 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 RABL6Q3YEC7 729 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-223ENST00000553686 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 VASNQ6EMK4 673 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
ATXN3-223ENST00000553686 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 RMDN1Q96DB5 314 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 SUCLG2Q96I99 432 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 TRPV6Q9H1D0 765 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ALG13Q9NP73 1137 aaKnown RBP7.07□□□□□ -1.28
ATXN3-223ENST00000553686 MTUS1Q9ULD2 1270 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 ZNF318Q5VUA4 2279 aa7.07□□□□□ -1.28
ATXN3-223ENST00000553686 FAM186AA6NE01 2351 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 ACACBO00763 2458 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 B4GALT4O60513 344 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 ENO2P09104 434 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 JAM2P57087 298 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 PHF19Q5T6S3 580 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 CXCL17Q6UXB2 119 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 FERMT3Q86UX7 667 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 ABHD16BQ9H3Z7 469 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 BICC1Q9H694 974 aaKnown RBP7.06□□□□□ -1.28
ATXN3-223ENST00000553686 DNAJC18Q9H819 358 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 L2HGDHQ9H9P8 463 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
ATXN3-223ENST00000553686 GVINP1Q7Z2Y8 2422 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 FAM90A27PA6NNH2 459 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 RASGRP1O95267 797 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-223ENST00000553686 CYP1A1P04798 512 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-223ENST00000553686 ZNF28P17035 718 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 PHKA1P46020 1223 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 VCPP55072 806 aaKnown RBP7.05□□□□□ -1.28
ATXN3-223ENST00000553686 PFKPQ01813 784 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 ABCB5Q2M3G0 1257 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 CERKLQ49MI3 558 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-223ENST00000553686 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 UBXN11Q5T124 520 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 MAMDC4Q6UXC1 1216 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 DTX3Q8N9I9 347 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 ACER1Q8TDN7 264 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 KAZALD1Q96I82 304 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 RIC8BQ9NVN3 520 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 RAI14Q9P0K7 980 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 ATP23Q9Y6H3 246 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 TRANK1O15050 2925 aa7.05□□□□□ -1.28
ATXN3-223ENST00000553686 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 LCHNA4D1U4 455 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 LINC01553A4QN01 128 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 MAN2B1O00754 1011 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 MBTPS2O43462 519 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 FLOT1O75955 427 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 NBPF7P0C2Y1 421 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 STAT3P40763 770 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 GLRBP48167 497 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 BFSP2Q13515 415 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 SHROOM1Q2M3G4 852 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 TCEAL5Q5H9L2 206 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 TATDN1Q6P1N9 297 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 SLC4A10Q6U841 1118 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 MAGEB6Q8N7X4 407 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 KLHDC4Q8TBB5 520 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 TGFBRAP1Q8WUH2 860 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 NSUN4Q96CB9 384 aaKnown RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 TMEM168Q9H0V1 697 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 ALDH8A1Q9H2A2 487 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 PLXNA1Q9UIW2 1896 aa7.04□□□□□ -1.28
ATXN3-223ENST00000553686 ANKRD11Q6UB99 2663 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-223ENST00000553686 DLG5Q8TDM6 1919 aa7.03□□□□□ -1.28
ATXN3-223ENST00000553686 KMT2BQ9UMN6 2715 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-223ENST00000553686 B8ZZF3 427 aa7.03□□□□□ -1.28
ATXN3-223ENST00000553686 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
ATXN3-223ENST00000553686 KCNK3O14649 394 aa7.03□□□□□ -1.28
ATXN3-223ENST00000553686 APAF1O14727 1248 aa7.03□□□□□ -1.28
ATXN3-223ENST00000553686 GJB5O95377 273 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms