RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PDXDC1Q6P996 788 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 DCLRE1AQ6PJP8 1040 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 GRASPQ7Z6J2 395 aaPredicted RBP17.33■□□□□ 0.36
ACTN1-209ENST00000553659 HASPINQ8TF76 798 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 PDZD7Q9H5P4 517 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 ARHGEF3Q9NR81 526 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 SNTG2Q9NY99 539 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 ZSCAN12O43309 604 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 RECQL4O94761 1208 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 GNA14O95837 355 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 DCNP07585 359 aaKnown RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 GAP43P17677 238 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 HOXA9P31269 272 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 ID4P47928 161 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 NAB2Q15742 525 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 TMEM132AQ24JP5 1023 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 PPM1LQ5SGD2 360 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 LIN9Q5TKA1 542 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 ERMP1Q7Z2K6 904 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 ST13P5Q8NFI4 369 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 BAG1Q99933 345 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 DUSP9Q99956 384 aaKnown RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 ADPGKQ9BRR6 497 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 RPP25Q9BUL9 199 aaKnown RBP17.32■□□□□ 0.36
ACTN1-209ENST00000553659 NUP58Q9BVL2 599 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 CXCL16Q9H2A7 254 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 DLGAP2Q9P1A6 1054 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 CDH7Q9ULB5 785 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 VPS13AQ96RL7 3174 aa17.32■□□□□ 0.36
ACTN1-209ENST00000553659 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 ACKR2O00590 384 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 LMNAP02545 664 aaKnown RBP17.31■□□□□ 0.36
ACTN1-209ENST00000553659 PRKCBP05771 671 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 C8AP07357 584 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 STARD6P59095 220 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 GPC5P78333 572 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 ANKRD40Q6AI12 368 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 PADI6Q6TGC4 694 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 PARM1Q6UWI2 310 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 BSNDQ8WZ55 320 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 FGF14Q92915 247 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 SHDQ96IW2 340 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 CEP63Q96MT8 703 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 CCDC113Q9H0I3 377 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 TAB2Q9NYJ8 693 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 PAXBP1Q9Y5B6 917 aa17.31■□□□□ 0.36
ACTN1-209ENST00000553659 ADAM12O43184 909 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 TEX33O43247 280 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 XYLBO75191 536 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 TBCAO75347 108 aaKnown RBP17.3■□□□□ 0.36
ACTN1-209ENST00000553659 NAMPTP43490 491 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
ACTN1-209ENST00000553659 NTHL1P78549 312 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 FKBP3Q00688 224 aaKnown RBP17.3■□□□□ 0.36
ACTN1-209ENST00000553659 UBXN1Q04323 297 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 RAB33AQ14088 237 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 MTSS1LQ765P7 747 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 C1orf210Q8IVY1 113 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-209ENST00000553659 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 DEPTORQ8TB45 409 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 FGF13Q92913 245 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 CNOT6LQ96LI5 555 aaKnown RBP17.3■□□□□ 0.36
ACTN1-209ENST00000553659 TUBGCP2Q9BSJ2 902 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 VPS16Q9H269 839 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 SEL1LQ9UBV2 794 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 USP20Q9Y2K6 914 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 R4GN57 208 aa17.3■□□□□ 0.36
ACTN1-209ENST00000553659 ARHGEF35A5YM69 484 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 CCL16O15467 120 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 MFAP3LO75121 409 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 POU2F2P09086 479 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 SP9P0CG40 484 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 FGFR3P22607 806 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 MTIF2P46199 727 aaKnown RBP17.29■□□□□ 0.36
ACTN1-209ENST00000553659 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 STXBP4Q6ZWJ1 553 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 RTL10Q7L3V2 364 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 PJA1Q8NG27 643 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 POLIQ9UNA4 740 aa17.29■□□□□ 0.36
ACTN1-209ENST00000553659 R3HCC1Q9Y3T6 440 aaKnown RBP17.29■□□□□ 0.36
ACTN1-209ENST00000553659 CITO14578 2027 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 UBE4BO95155 1302 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 EDN1P05305 212 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 TNNT1P13805 278 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 FECHP22830 423 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 OR1D2P34982 312 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 DCAF4L1Q3SXM0 396 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 ZC3H14Q6PJT7 736 aaKnown RBP17.28■□□□□ 0.36
ACTN1-209ENST00000553659 ITFG1Q8TB96 612 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 SLC7A14Q8TBB6 771 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms