RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TIMM13Q9Y5L4 95 aaPredicted RBP14.88□□□□□ -0.03
TUBB3-202ENST00000553656 BACE2Q9Y5Z0 518 aa14.88□□□□□ -0.03
TUBB3-202ENST00000553656 PRRC2BQ5JSZ5 2229 aaKnown RBP14.87□□□□□ -0.03
TUBB3-202ENST00000553656 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 TEX28O15482 410 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 LILRB3O75022 631 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 STAU1O95793 577 aaKnown RBP14.87□□□□□ -0.03
TUBB3-202ENST00000553656 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
TUBB3-202ENST00000553656 HLA-DRAP01903 254 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 MARSP56192 900 aaKnown RBP14.87□□□□□ -0.03
TUBB3-202ENST00000553656 MYL7Q01449 175 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 SGSM1Q2NKQ1 1148 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 ZNF667Q5HYK9 610 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 C15orf39Q6ZRI6 1047 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 THEM5Q8N1Q8 247 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 TOP6BLQ8N6T0 577 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 TAF4BQ92750 862 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 SLC35C1Q96A29 364 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 GDAP2Q9NXN4 497 aa14.87□□□□□ -0.03
TUBB3-202ENST00000553656 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
TUBB3-202ENST00000553656 ATG2AQ2TAZ0 1938 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 CLASP2O75122 1294 aaKnown RBP14.86□□□□□ -0.03
TUBB3-202ENST00000553656 OAZ2O95190 189 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 VNN1O95497 513 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 GLUD1P00367 558 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 CYP11A1P05108 521 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 TPM2P07951 284 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 RPL17P18621 184 aaKnown RBP14.86□□□□□ -0.03
TUBB3-202ENST00000553656 WDR72Q3MJ13 1102 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 WDR44Q5JSH3 913 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 WSCD1Q658N2 575 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 LLGL2Q6P1M3 1020 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 DPH6Q7L8W6 267 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 ADGRF2Q8IZF7 708 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 EFHBQ8N7U6 833 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 FBXL13Q8NEE6 735 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 ANKRD20A12PQ8NF67 263 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 TAS1R2Q8TE23 839 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 CLDND1Q9NY35 253 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 DPP7Q9UHL4 492 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 CDY1Q9Y6F8 540 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 SCN1AP35498 2009 aa14.86□□□□□ -0.03
TUBB3-202ENST00000553656 CDH23Q9H251 3354 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 OR6C75A6NL08 312 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 KCNJ18B7U540 433 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CPB1P15086 417 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 OR1D2P34982 312 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 FMO5P49326 533 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 ZNF165P49910 485 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 ARPP19P56211 112 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
TUBB3-202ENST00000553656 NOP14P78316 857 aaKnown RBP14.85□□□□□ -0.03
TUBB3-202ENST00000553656 MRPL58Q14197 206 aaKnown RBP14.85□□□□□ -0.03
TUBB3-202ENST00000553656 KCNJ12Q14500 433 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CBWD6Q4V339 395 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 HSP90AA4PQ58FG1 418 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CBWD3Q5JTY5 395 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CBWD5Q5RIA9 395 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 SCARA3Q6AZY7 606 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 PALB2Q86YC2 1186 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CASP10Q92851 521 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 PABPC5Q96DU9 382 aaKnown RBP14.85□□□□□ -0.03
TUBB3-202ENST00000553656 CLSTN3Q9BQT9 956 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 XYLT2Q9H1B5 865 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 VRTNQ9H8Y1 702 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 RAB20Q9NX57 234 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 HCFC2Q9Y5Z7 792 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 SZT2Q5T011 3432 aa14.85□□□□□ -0.03
TUBB3-202ENST00000553656 VWA8A3KMH1 1905 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 SMTNL1A8MU46 457 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 BECN2A8MW95 431 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 P4HA2O15460 535 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 CAVIN2O95810 425 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 ASS1P00966 412 aaKnown RBP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 PRKCSHP14314 528 aaPredicted RBP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 EEF1GP26641 437 aaKnown RBP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 LHX1P48742 406 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 KCNH2Q12809 1159 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 RAB33AQ14088 237 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 MAN2A1Q16706 1144 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 SLC8B1Q6J4K2 584 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 HLA-CQ95604 372 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 BPIFA3Q9BQP9 254 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 PI4K2AQ9BTU6 479 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 FUCA2Q9BTY2 467 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 SNX25Q9H3E2 840 aa14.84□□□□□ -0.03
TUBB3-202ENST00000553656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 SAMSN1Q9NSI8 373 aaKnown RBP14.84□□□□□ -0.03
TUBB3-202ENST00000553656 MYO7AQ13402 2215 aa14.83□□□□□ -0.04
TUBB3-202ENST00000553656 PES1O00541 588 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms