RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SMC1AQ14683 1233 aaKnown RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PTPN14Q15678 1187 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ECM1Q16610 540 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LONRF3Q496Y0 759 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM160B1Q5W0V3 765 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SWSAP1Q6NVH7 229 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KCNT2Q6UVM3 1135 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF574Q6ZN55 896 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C15orf39Q6ZRI6 1047 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 VN1R5Q7Z5H4 357 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM228AQ86W67 206 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CCDC60Q8IWA6 550 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MB21D2Q8IYB1 491 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LRRC43Q8N309 656 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AGBL5Q8NDL9 886 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SLC22A17Q8WUG5 538 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF558Q96NG5 402 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TBC1D32Q96NH3 1257 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SCLT1Q96NL6 688 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MXRA8Q9BRK3 442 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LRRC2Q9BYS8 371 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM117Q9H0C3 514 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AGO4Q9HCK5 861 aaKnown RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF302Q9NR11 478 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM161AQ9NX61 479 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM13BQ9NYF5 915 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 STIM2Q9P246 746 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TCEAL9Q9UHQ7 104 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AKT3Q9Y243 479 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MSRB2Q9Y3D2 182 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NEUROG3Q9Y4Z2 214 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CELSR3Q9NYQ7 3312 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TEX15Q9BXT5 2789 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LOXHD1Q8IVV2 1947 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SH2B2O14492 632 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MAFGO15525 162 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 HBP1O60381 514 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CXCL14O95715 111 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 GSPT1P15170 499 aaKnown RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ZSCAN20P17040 1043 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 FGFR4P22455 802 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CLCN3P51790 818 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MTAPQ13126 283 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SRSF5Q13243 272 aaKnown RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SIM2Q14190 667 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 UBXN2BQ14CS0 331 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 NONOQ15233 471 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 LETM2Q2VYF4 491 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CEP55Q53EZ4 464 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ODR4Q5SWX8 454 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 WWC2Q6AWC2 1192 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 KIAA1211LQ6NV74 962 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 C1orf127Q8N9H9 656 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 HELQQ8TDG4 1101 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 RUFY2Q8WXA3 655 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SHDQ96IW2 340 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CASD1Q96PB1 797 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MYADMQ96S97 322 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ANO3Q9BYT9 981 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ELAC1Q9H777 363 aaKnown RBP6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SFXN1Q9H9B4 322 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 LTB4R2Q9NPC1 389 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SPG21Q9NZD8 308 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 KLK13Q9UKR3 277 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 LAMA1P25391 3075 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 PATJQ8NI35 1801 aa6.27□□□□□ -1.41
SMARCE1P3-201ENST00000553649 NFASCO94856 1347 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SPTA1P02549 2419 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ANHXE9PGG2 379 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 J3QKU1 62 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ZC3H11AO75152 810 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CSDE1O75534 798 aaKnown RBP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 C22orf31O95567 290 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SSBP05455 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ZNF806P0C7X5 589 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MYBP10242 640 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CD72P21854 359 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CHMLP26374 656 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 MCM5P33992 734 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 RPS9P46781 194 aaKnown RBP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ALDH7A1P49419 539 aaKnown RBP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 SLC26A2P50443 739 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 USP11P51784 963 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 ADCY7P51828 1080 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 CRYBB1P53674 252 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 NLRP11P59045 1033 aaKnown RBP6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 GPC5P78333 572 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 FAM189BP81408 668 aa6.26□□□□□ -1.41
SMARCE1P3-201ENST00000553649 HTR4Q13639 388 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms