RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CYP2J2P51589 502 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 SMARCB1Q12824 385 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 TMEM31Q5JXX7 168 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 SLC9A9Q8IVB4 645 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 C1orf127Q8N9H9 656 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 NXPE3Q969Y0 559 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
SHMT2-204ENST00000553324 RMND1Q9NWS8 449 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 POLIQ9UNA4 740 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 SMC2O95347 1197 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 KRT19P08727 400 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 TNNI1P19237 187 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
SHMT2-204ENST00000553324 CYP24A1Q07973 514 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 ADCY1Q08828 1119 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 GPR17Q13304 367 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
SHMT2-204ENST00000553324 PSMD6Q15008 389 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-204ENST00000553324 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-204ENST00000553324 ELMOD1Q8N336 334 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 TMEM130Q8N3G9 435 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 BORCS6Q96GS4 357 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 CHMP5Q9NZZ3 219 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 LIMD1Q9UGP4 676 aa16.53■□□□□ 0.24
SHMT2-204ENST00000553324 CCL16O15467 120 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 HUS1O60921 280 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 PRR29P0C7W0 189 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 DLATP10515 647 aaKnown RBP16.52■□□□□ 0.24
SHMT2-204ENST00000553324 PTPN2P17706 415 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 FSHRP23945 695 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-204ENST00000553324 AP3M2P53677 418 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 WNT7BP56706 349 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 ZXDAP98168 799 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 PTPN21Q16825 1174 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 UBALD2Q8IYN6 164 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 TMEM86AQ8N2M4 240 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 GUF1Q8N442 669 aaKnown RBP16.52■□□□□ 0.24
SHMT2-204ENST00000553324 ENGASEQ8NFI3 743 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 GSDMAQ96QA5 445 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 MTMR12Q9C0I1 747 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 DMAC2Q9NW81 257 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 GDAP2Q9NXN4 497 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 IGSF9Q9P2J2 1179 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 EPS15L1Q9UBC2 864 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 HSFX1Q9UBD0 423 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 SORCS3Q9UPU3 1222 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
SHMT2-204ENST00000553324 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 RPL13P26373 211 aaKnown RBP16.51■□□□□ 0.23
SHMT2-204ENST00000553324 PLD1Q13393 1074 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 MTMR3Q13615 1198 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 TRAPPC11Q7Z392 1133 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 CXorf38Q8TB03 319 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 C2orf15Q8WU43 125 aaKnown RBP16.51■□□□□ 0.23
SHMT2-204ENST00000553324 CCDC127Q96BQ5 260 aa16.51■□□□□ 0.23
SHMT2-204ENST00000553324 ZNF512Q96ME7 567 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-204ENST00000553324 AVENQ9NQS1 362 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-204ENST00000553324 ZNF197O14709 1029 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 SEC24AO95486 1093 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 NR3C1P04150 777 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 LAMP2P13473 410 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 ALDH1A3P47895 512 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 LHX1P48742 406 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 TUFMP49411 452 aaKnown RBP16.5■□□□□ 0.23
SHMT2-204ENST00000553324 BFSP1Q12934 665 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 NFIL3Q16649 462 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
SHMT2-204ENST00000553324 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 DCP1BQ8IZD4 617 aaKnown RBP16.5■□□□□ 0.23
SHMT2-204ENST00000553324 TOP6BLQ8N6T0 577 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 LEMD2Q8NC56 503 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 FEZF2Q8TBJ5 459 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 HPDLQ96IR7 371 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 DNMT3BQ9UBC3 853 aaKnown RBP16.5■□□□□ 0.23
SHMT2-204ENST00000553324 SIX4Q9UIU6 781 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
SHMT2-204ENST00000553324 VWA8A3KMH1 1905 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 MAPK13O15264 365 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 KINO60870 393 aaKnown RBP16.49■□□□□ 0.23
SHMT2-204ENST00000553324 MICAL2O94851 1124 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 FAM163BP0C2L3 166 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 MYL7Q01449 175 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 TSPY1Q01534 308 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 SIGLEC14Q08ET2 396 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 DUSP4Q13115 394 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 TRPC3Q13507 836 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms