RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CATSPER3Q86XQ3 398 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 HIST1H2AHQ96KK5 128 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 HIST1H2AJQ99878 128 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 H2AFJQ9BTM1 129 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 LSM7Q9UK45 103 aaKnown RBP12.08□□□□□ -0.48
SYNE2-208ENST00000553289 CDY2AQ9Y6F7 541 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 CDY1Q9Y6F8 540 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 STIP1P31948 543 aaKnown RBP12.08□□□□□ -0.48
SYNE2-208ENST00000553289 ITGA8P53708 1063 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 TEX9Q8N6V9 391 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 L2HGDHQ9H9P8 463 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 NPHS2Q9NP85 383 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 ERAP1Q9NZ08 941 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 RRN3P2A6NIE6 340 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
SYNE2-208ENST00000553289 SERPINB10P48595 397 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 KDSRQ06136 332 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 CNGA3Q16281 694 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 DCP1BQ8IZD4 617 aaKnown RBP12.08□□□□□ -0.48
SYNE2-208ENST00000553289 TBC1D19Q8N5T2 526 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 TPCN2Q8NHX9 752 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 RUBCNLQ9H714 662 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
SYNE2-208ENST00000553289 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 MAN1A2O60476 641 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 APOA4P06727 396 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SNAPC2Q13487 334 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 WDR93Q6P2C0 686 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 LRRC8BQ6P9F7 803 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 C3orf62Q6ZUJ4 267 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SH3KBP1Q96B97 665 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 RGS7P49802 495 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 KRT72Q14CN4 511 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 PDIA6Q15084 440 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 GPAT2Q6NUI2 795 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 RBM43Q6ZSC3 357 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 LONP2Q86WA8 852 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 PARK7Q99497 189 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 DBR1Q9UK59 544 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CST8O60676 142 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 RBP3P10745 1247 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CCNJLQ8IV13 435 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 MFN1Q8IWA4 741 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CYFIP2Q96F07 1278 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 ZSWIM1Q9BR11 485 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 FAM167BQ9BTA0 163 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 GOLPH3Q9H4A6 298 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 KCNH4Q9UQ05 1017 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 FDFT1P37268 417 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
SYNE2-208ENST00000553289 PTK6Q13882 451 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 DCAF4L1Q3SXM0 396 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 DAB2IPQ5VWQ8 1189 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 RRM2BQ7LG56 351 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 LINC00523Q86TU6 105 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 ATXN7L3BQ96GX2 97 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 DACH2Q96NX9 599 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 CCDC134Q9H6E4 229 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 BLOC1S6Q9UL45 172 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 HPSEQ9Y251 543 aa12.07□□□□□ -0.48
SYNE2-208ENST00000553289 NDUFS3O75489 264 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KCNA4P22459 653 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ANKS3Q6ZW76 656 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 CD302Q8IX05 232 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 C4orf33Q8N1A6 199 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 TASP1Q9H6P5 420 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 PCMTD2Q9NV79 361 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KIAA1257Q9ULG3 409 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 CCT8L1PA6NM43 557 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 PHF20L1A8MW92 1017 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 SRP72O76094 671 aaKnown RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 IRAK1P51617 712 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms