RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SEC24CP53992 1094 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 SNAPC2Q13487 334 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 FLYWCH1Q4VC44 716 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 FUBP1Q96AE4 644 aaKnown RBP6.14□□□□□ -1.43
ATXN3-217ENST00000553287 GOLGA3Q08378 1498 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 RAPGEF6Q8TEU7 1601 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 ESRRBO95718 433 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 LMNAP02545 664 aaKnown RBP6.13□□□□□ -1.43
ATXN3-217ENST00000553287 CD1AP06126 327 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 SMARCA1P28370 1054 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 MPLP40238 635 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 ANAPC15P60006 121 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 EXOSC10Q01780 885 aaKnown RBP6.13□□□□□ -1.43
ATXN3-217ENST00000553287 ZBTB46Q86UZ6 589 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 COLGALT2Q8IYK4 626 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 CPA6Q8N4T0 437 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 Q8NA96 180 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
ATXN3-217ENST00000553287 TLR10Q9BXR5 811 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 UNKLQ9H9P5 680 aaKnown RBP6.13□□□□□ -1.43
ATXN3-217ENST00000553287 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 ZNHIT2Q9UHR6 403 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 LUC7L2Q9Y383 392 aaKnown RBP6.13□□□□□ -1.43
ATXN3-217ENST00000553287 POGZQ7Z3K3 1410 aa6.13□□□□□ -1.43
ATXN3-217ENST00000553287 OVOL3O00110 214 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 MAST3O60307 1309 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 ZFPL1O95159 310 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 FDXRP22570 491 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 VAV2P52735 878 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 FHOD3Q2V2M9 1422 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 SLC44A3Q8N4M1 653 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 C3orf20Q8ND61 904 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-217ENST00000553287 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-217ENST00000553287 ARHGEF12Q9NZN5 1544 aa6.12□□□□□ -1.43
ATXN3-217ENST00000553287 C3P01024 1663 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 NUP153P49790 1475 aaKnown RBP6.11□□□□□ -1.43
ATXN3-217ENST00000553287 UHRF1BP1Q6BDS2 1440 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 LRRC14BA6NHZ5 514 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 F2RL2O00254 374 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 IL33O95760 270 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 NUDT3O95989 172 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 PLA2G5P39877 138 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 MPP3Q13368 585 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 ZNF365Q70YC5 407 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 DNAJC10Q8IXB1 793 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
ATXN3-217ENST00000553287 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 KLHL32Q96NJ5 620 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-217ENST00000553287 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 POLHQ9Y253 713 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
ATXN3-217ENST00000553287 MED1Q15648 1581 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-217ENST00000553287 EFCAB5A4FU69 1503 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 ZMYM4Q5VZL5 1548 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 SCAPERQ9BY12 1400 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 POU2F2P09086 479 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 CYP2C19P33261 490 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 HSPA1LP34931 641 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 ADRA1BP35368 520 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
ATXN3-217ENST00000553287 IGBP1P78318 339 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 FPGSQ05932 587 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-217ENST00000553287 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 Q6ZNX1 250 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 USP45Q70EL2 814 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 SIDT1Q9NXL6 827 aaKnown RBP6.1□□□□□ -1.43
ATXN3-217ENST00000553287 DMTF1Q9Y222 760 aa6.1□□□□□ -1.43
ATXN3-217ENST00000553287 CDK13Q14004 1512 aaKnown RBP6.09□□□□□ -1.43
ATXN3-217ENST00000553287 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 CXCR5P32302 372 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 NEK2P51955 445 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 CCDC93Q567U6 631 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 PDPRQ8NCN5 879 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 BRD9Q9H8M2 597 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms