RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 UPP1Q16831 310 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 DPH6Q7L8W6 267 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CCDC112Q8NEF3 446 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 SHC3Q92529 594 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 TOP1MTQ969P6 601 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 ZBED2Q9BTP6 218 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 NHEJ1Q9H9Q4 299 aaPredicted RBP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 DAAM1Q9Y4D1 1078 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 NT5C1B-RDH14C9J2C7 533 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CYB561D2O14569 222 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 B4GALT3O60512 393 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 EFCAB14O75071 495 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SERPING1P05155 500 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CCDC172P0C7W6 258 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SSTR3P32745 418 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 EIF4A3P38919 411 aaKnown RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 PBX3P40426 434 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 BRCC3P46736 316 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 YWHAEP62258 255 aaKnown RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TAF3Q5VWG9 929 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SLC47A2Q86VL8 602 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TMTC1Q8IUR5 882 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 C3orf58Q8NDZ4 430 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 APPL2Q8NEU8 664 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 OR6B3Q8NGW1 331 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CCDC42Q96M95 316 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 NRDE2Q9H7Z3 1164 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 MYO6Q9UM54 1294 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TIMM13Q9Y5L4 95 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 AKR1B10O60218 316 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 DGKIO75912 1065 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 BAIAP3O94812 1187 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 ALDH2P05091 517 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CLCN1P35523 988 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CDR1P51861 262 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TMEM240Q5SV17 173 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 PSRC1Q6PGN9 363 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 IRF2BP2Q7Z5L9 587 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TMEM139Q8IV31 216 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 COLGALT2Q8IYK4 626 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 FAM71AQ8IYT1 594 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 RBBP8NLQ8NC74 664 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SYN2Q92777 582 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 SENP8Q96LD8 212 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 UROC1Q96N76 676 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 YME1L1Q96TA2 773 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 MRPL9Q9BYD2 267 aaKnown RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 VRTNQ9H8Y1 702 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TMEM51Q9NW97 253 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 CXXC1Q9P0U4 656 aaPredicted RBP9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 ARHGAP20Q9P2F6 1191 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 NR2E3Q9Y5X4 410 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
AC055716.2-201ENST00000552545 TADA2AO75478 443 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 KIF4AO95239 1232 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 ITGB1P05556 798 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 PDGFRBP09619 1106 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 CD19P15391 556 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 ACO1P21399 889 aaKnown RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 BCAR1P56945 870 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 PTK2Q05397 1052 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 BTG3Q14201 252 aaPredicted RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 SOWAHAQ2M3V2 549 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 DCLRE1AQ6PJP8 1040 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 RAD9BQ6WBX8 426 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 BCO2Q9BYV7 579 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 PDCL3Q9H2J4 239 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 SNX25Q9H3E2 840 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 SPTLC3Q9NUV7 552 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 PYCARDQ9ULZ3 195 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 FAN1Q9Y2M0 1017 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 NRP1O14786 923 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 INPPL1O15357 1258 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 ARHGAP6O43182 974 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 THAP12O43422 761 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 HNRNPH3P31942 346 aaKnown RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 PDE6CP51160 858 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 NDST1P52848 882 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 MEA1Q16626 185 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 TIGD5Q53EQ6 642 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 ZNF571Q7Z3V5 609 aaPredicted RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 CEP57Q86XR8 500 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 FMNL3Q8IVF7 1028 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 SLC20A1Q8WUM9 679 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 DESI2Q9BSY9 194 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 CYP3A43Q9HB55 503 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 HMGXB4Q9UGU5 601 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 BZW2Q9Y6E2 419 aaKnown RBP9.32□□□□□ -0.92
AC055716.2-201ENST00000552545 SLC4A7Q9Y6M7 1214 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms