RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, human

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGFBR1-209	ENST00000552516	SLC17A8	Q8NDX2	589 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	BEST2	Q8NFU1	509 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MICAL1	Q8TDZ2	1067 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ASB14	A6NK59	587 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TCP11X1	B4DZS4	312 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TMEM253	P0C7T8	217 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	APTX	Q7Z2E3	356 aa	Known RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	LPP	Q93052	612 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	KLRG1	Q96E93	195 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SMYD3	Q9H7B4	428 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	OLFML3	Q9NRN5	406 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ANKEF1	Q9NU02	776 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TRAF3IP3	Q9Y228	551 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CST3	P01034	146 aa	Predicted RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RBP3	P10745	1247 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CHN1	P15882	459 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ZNF200	P98182	395 aa	Predicted RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MIF4GD	A9UHW6	222 aa	Known RBP	11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NFIC	P08651	508 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CES3	Q6UWW8	571 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TMEM161B	Q8NDZ6	487 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ATP6V1G3	Q96LB4	118 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PCDH10	Q9P2E7	1040 aa		11.37	□□□□□ -0.59
TGFBR1-209	ENST00000552516	IQCA1L	A6NCM1	817 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CATSPERG	Q6ZRH7	1159 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RSPH3	Q86UC2	560 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RNF139	Q8WU17	664 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	DEPDC1B	Q8WUY9	529 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ZNF606	Q8WXB4	792 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NIF3L1	Q9GZT8	377 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RNPEP	Q9H4A4	650 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	GBA2	Q9HCG7	927 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	KIAA1586	Q9HCI6	787 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NR2E3	Q9Y5X4	410 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	VIRMA	Q69YN4	1812 aa	Known RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	IGLV3-22	A0A075B6J6	115 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ZBBX	A8MT70	800 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	GOLGA8T	H3BQL2	631 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CRCP	O75575	148 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	GHR	P10912	638 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CDR2	Q01850	454 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CUL1	Q13616	776 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MXD4	Q14582	209 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CCDC197	Q8NCU1	140 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SLC7A14	Q8TBB6	771 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RNF14	Q9UBS8	474 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	RPS6KA5	O75582	802 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	OR1G1	P47890	313 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SGSM1	Q2NKQ1	1148 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	JADE1	Q6IE81	842 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MIB1	Q86YT6	1006 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TRIM11	Q96F44	468 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	DPP3	Q9NY33	737 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	FRMPD4	Q14CM0	1322 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	LACTBL1	A8MY62	500 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TBXAS1	P24557	533 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ETFB	P38117	255 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	KCNJ6	P48051	423 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SP2	Q02086	613 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MEI1	Q5TIA1	1274 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PAPD7	Q5XG87	772 aa	Known RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ACAD10	Q6JQN1	1059 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CENPU	Q71F23	418 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CHST13	Q8NET6	341 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CYTH2	Q99418	400 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ABI2	Q9NYB9	513 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CPB1	P15086	417 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PHB	P35232	272 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	GRIK1	P39086	918 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CASP2	P42575	452 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	EFNA5	P52803	228 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NRL	P54845	237 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TMCO4	Q5TGY1	634 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TMC2	Q8TDI7	906 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ALG3	Q92685	438 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ZSWIM1	Q9BR11	485 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ERP44	Q9BS26	406 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PITPNM3	Q9BZ71	974 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	KIF9	Q9HAQ2	790 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	SARS2	Q9NP81	518 aa	Known RBP	11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	IP6K2	Q9UHH9	426 aa		11.36	□□□□□ -0.59
TGFBR1-209	ENST00000552516	MAP1B	P46821	2468 aa	Known RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ZNF142	P52746	1687 aa	Predicted RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CFLAR	O15519	480 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NCF2	P19878	526 aa	Predicted RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PBX1	P40424	430 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	POU5F1B	Q06416	359 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	CAPS	Q13938	189 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	TDRD10	Q5VZ19	366 aa	Known RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	ALKBH8	Q96BT7	664 aa	Known RBP	11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	PCDHB18P	Q96TA0	734 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	WNT8A	Q9H1J5	351 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	GAN	Q9H2C0	597 aa		11.35	□□□□□ -0.59
TGFBR1-209	ENST00000552516	NEU2	Q9Y3R4	380 aa		11.35	□□□□□ -0.59

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