RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ADAM9Q13443 819 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 BIRC3Q13489 604 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 TRPC3Q13507 836 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 EDRF1Q3B7T1 1238 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 COBLL1Q53SF7 1204 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 PPM1LQ5SGD2 360 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 ISM2Q6H9L7 571 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 RSPO2Q6UXX9 243 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 C15orf39Q6ZRI6 1047 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 CCDC149Q6ZUS6 474 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 TRAPPC11Q7Z392 1133 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 GPR149Q86SP6 731 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 PHF7Q9BWX1 381 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 ZDHHC7Q9NXF8 308 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 SIX4Q9UIU6 781 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 MTCL1Q9Y4B5 1905 aaKnown RBP19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 CCDC195A0A1B0GUA6 201 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 BIN1O00499 593 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 CETN3O15182 167 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 HUS1O60921 280 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 RFPL2O75678 378 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 ZMYND10O75800 440 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 WEE2P0C1S8 567 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 ZP2Q05996 745 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 CAMK4Q16566 473 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 TPGS2Q68CL5 300 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 CYP26C1Q6V0L0 522 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 FAM186BQ8IYM0 893 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 THEM5Q8N1Q8 247 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 ZNF461Q8TAF7 563 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 SLC7A14Q8TBB6 771 aa19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 SMG7Q92540 1137 aaKnown RBP19.89■□□□□ 0.77
PRPF40B-216ENST00000552301 WDR27A2RRH5 827 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 PRRG1O14668 218 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 MAPK13O15264 365 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 TBC1D4O60343 1298 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 CYP11A1P05108 521 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 EPB41P11171 864 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 PSMC2P35998 433 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 ZCWPW2Q504Y3 356 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 WSCD1Q658N2 575 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 INTS8Q75QN2 995 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 ADSSL1Q8N142 457 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 GJD3Q8N144 294 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 TMC2Q8TDI7 906 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 PARD3BQ8TEW8 1205 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 HPDLQ96IR7 371 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 CDH22Q9UJ99 828 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 SNX9Q9Y5X1 595 aa19.88■□□□□ 0.77
PRPF40B-216ENST00000552301 MUC3AQ02505 3323 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 LRRIQ3A6PVS8 624 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 XYLBO75191 536 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 HNRNPA1P09651 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 LRRC63Q05C16 580 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 UVSSAQ2YD98 709 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 CENPPQ6IPU0 288 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 KLHL10Q6JEL2 608 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 RTL10Q7L3V2 364 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 DHTKD1Q96HY7 919 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 RPGRIP1Q96KN7 1286 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 PRKD2Q9BZL6 878 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 POMKQ9H5K3 350 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 CYP4F11Q9HBI6 524 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 AFF4Q9UHB7 1163 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 POLIQ9UNA4 740 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 NR2E1Q9Y466 385 aa19.87■□□□□ 0.77
PRPF40B-216ENST00000552301 TSC2P49815 1807 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 AKAP3O75969 853 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 ABLIM3O94929 683 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 LRG1P02750 347 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 ATF2P15336 505 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 HOXA9P31269 272 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 VAMP7P51809 220 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 MORC3Q14149 939 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 TMEM86AQ8N2M4 240 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 TRIML1Q8N9V2 468 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 CXorf38Q8TB03 319 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 PLEKHO2Q8TD55 490 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 BORCS6Q96GS4 357 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 MKNK1Q9BUB5 465 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 RHOBTB2Q9BYZ6 727 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 CLSTN2Q9H4D0 955 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 GDAP2Q9NXN4 497 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 KIAA1468Q9P260 1216 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 MAFFQ9ULX9 164 aa19.86■□□□□ 0.77
PRPF40B-216ENST00000552301 TNFRSF10AO00220 468 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 CCL16O15467 120 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 OR4Q2P0C623 313 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 SP100P23497 879 aaPredicted RBP19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 CCNE1P24864 410 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 TNNC1P63316 161 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 FKBP3Q00688 224 aaKnown RBP19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 MYL7Q01449 175 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 TSPY1Q01534 308 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 ADCY1Q08828 1119 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 ADGRF2Q8IZF7 708 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 PDCL2Q8N4E4 241 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 TOP6BLQ8N6T0 577 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 SPATA18Q8TC71 538 aa19.85■□□□□ 0.77
PRPF40B-216ENST00000552301 SYAP1Q96A49 352 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms