RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 ITGA8P53708 1063 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 YARSP54577 528 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PEX3P56589 373 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 YWHAEP62258 255 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 DLG4P78352 724 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ATP11AP98196 1134 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 BNIP1Q12981 228 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CBLBQ13191 982 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SPARCL1Q14515 664 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 MORF4L2Q15014 288 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SETDB1Q15047 1291 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PGM5Q15124 567 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ZACNQ401N2 412 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CMPK2Q5EBM0 449 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 XKR9Q5GH70 373 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PLEKHA7Q6IQ23 1121 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 HIBCHQ6NVY1 386 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 MON1BQ7L1V2 547 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 KRT27Q7Z3Y8 459 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SPATA21Q7Z572 469 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 POLNQ7Z5Q5 900 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ANKS1BQ7Z6G8 1248 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SLC47A2Q86VL8 602 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 EXOC8Q8IYI6 725 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 RCOR2Q8IZ40 523 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 RTKN2Q8IZC4 609 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 AGGF1Q8N302 714 aaeCLIP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 MAB21L3Q8N8X9 362 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ZNF526Q8TF50 670 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 POMGNT1Q8WZA1 660 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 APBB2Q92870 758 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ZNF622Q969S3 477 aaKnown RBP eCLIP5.7□□□□□ -1.54e-9■■□□□ 14.2
CCNT1-204ENST00000551989 TMEM237Q96Q45 408 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 FNBP1Q96RU3 617 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ELAC2Q9BQ52 826 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 FRMD8Q9BZ67 464 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 IMPG2Q9BZV3 1241 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 SLC38A10Q9HBR0 1119 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 NOD2Q9HC29 1040 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PARVAQ9NVD7 372 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 EURLQ9NYK6 297 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ARHGAP28Q9P2N2 729 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ZNF70Q9UC06 446 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ANAPC5Q9UJX4 755 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 STRIP2Q9ULQ0 834 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 TPX2Q9ULW0 747 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 NEU2Q9Y3R4 380 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CEP83Q9Y592 693 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CTDP1Q9Y5B0 961 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PCDHA10Q9Y5I2 948 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CD2APQ9Y5K6 639 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 USH1CQ9Y6N9 552 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 MROH7Q68CQ1 1323 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PTPRFP10586 1907 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CNTNAP1P78357 1384 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 GSTTP1A0A1W2PQM5 241 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 DENND3A2RUS2 1198 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 BACH1O14867 736 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 HNRNPDLO14979 420 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SLC16A4O15374 487 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CLDN3O15551 220 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 GAS2O43903 313 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 GRIN3BO60391 1043 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SPAG6O75602 509 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ZWINTO95229 277 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 IL1BP01584 269 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ATP5BP06576 529 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ITGAVP06756 1048 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 MMP10P09238 476 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 DLATP10515 647 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 POLD1P28340 1107 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ADCY8P40145 1251 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NAMPTP43490 491 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 MARCKSL1P49006 195 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SMCPP49901 116 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CACNB3P54284 484 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SNAP25P60880 206 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NCALDP61601 193 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NOMO3P69849 1222 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 IFI35P80217 286 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PIGHQ14442 188 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ACAP1Q15027 740 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PTPROQ16827 1216 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 KLHL38Q2WGJ6 581 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 GNPTABQ3T906 1256 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 FAM102BQ5T8I3 360 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 IZUMO3Q5VZ72 239 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NUGGCQ68CJ6 796 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 VSTM1Q6UX27 236 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CENPUQ71F23 418 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SV2AQ7L0J3 742 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ADAT2Q7Z6V5 191 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CBWD2Q8IUF1 395 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms