RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	PGM2L1	Q6PCE3	622 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	THAP5	Q7Z6K1	395 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	MTDH	Q86UE4	582 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	C12orf56	Q8IXR9	622 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	KIRREL3	Q8IZU9	778 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	LINS1	Q8NG48	757 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	METTL6	Q8TCB7	284 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CHFR	Q96EP1	664 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PDLIM2	Q96JY6	352 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CCDC28B	Q9BUN5	200 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	GHITM	Q9H3K2	345 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SPACA1	Q9HBV2	294 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	WWOX	Q9NZC7	414 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF804B	A4D1E1	1349 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483		A0A0U1RQK1	487 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483		A0A1W2PQ67	120 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF320	A2RRD8	509 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TAF4	O00268	1085 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PPEF2	O14830	753 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SMAD6	O43541	496 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SSX5	O60225	188 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	FMO6P	O60774	539 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PDE5A	O76074	875 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	GLI1	P08151	1106 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	FGFR1	P11362	822 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PTBP1	P26599	531 aa	Known RBP eCLIP	4.1	□□□□□ -1.75	6e-11	■■■■■ 37.1
CNOT2-231	ENST00000551483	CCR1	P32246	355 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	COPB1	P53618	953 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ADAM17	P78536	824 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	LGALS3BP	Q08380	585 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	NCAPH2	Q6IBW4	605 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TMC5	Q6UXY8	1006 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF554	Q86TJ5	538 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	RNF135	Q8IUD6	432 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SLC43A2	Q8N370	569 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	FAM71D	Q8N9W8	422 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	XXYLT1	Q8NBI6	393 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	C1orf216	Q8TAB5	229 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	BTN2A2	Q8WVV5	523 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CCDC127	Q96BQ5	260 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	RIPOR3	Q96MK2	946 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	NOX5	Q96PH1	765 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	UHRF1	Q96T88	793 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZKSCAN3	Q9BRR0	538 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	EFHD1	Q9BUP0	239 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CALN1	Q9BXU9	219 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	C2orf40	Q9H1Z8	148 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TPK1	Q9H3S4	243 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PLSCR4	Q9NRQ2	329 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	NSMCE4A	Q9NXX6	385 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ANAPC5	Q9UJX4	755 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SLC39A10	Q9ULF5	831 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PCDHGB2	Q9Y5G2	931 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	GOLGA8Q	A0A0J9YX86	632 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SYCE3	A1L190	88 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ATP5J2-PTCD1	G3V325	749 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483		L7N2F9	121 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PSMD11	O00231	422 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	IRAK2	O43187	625 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CHMP2A	O43633	222 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	DNAJB6	O75190	326 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	PRDM1	O75626	825 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	HEXIM1	O94992	359 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	IFNA8	P32881	189 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	BMI1	P35226	326 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	POU3F4	P49335	361 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	FXR2	P51116	673 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	DDR1	Q08345	913 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF252P-AS1	Q0IIN9	211 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	KCNAB2	Q13303	367 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CNGA2	Q16280	664 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF827	Q17R98	1081 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	VARS2	Q5ST30	1063 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	NDUFAF5	Q5TEU4	345 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	METTL2B	Q6P1Q9	378 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	DENND6A	Q8IWF6	608 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	GALNT15	Q8N3T1	639 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SCAI	Q8N9R8	606 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CHST13	Q8NET6	341 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TEX47	Q8TBZ9	253 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SMG7	Q92540	1137 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	LRRC39	Q96DD0	335 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SLITRK6	Q9H5Y7	841 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	NOL6	Q9H6R4	1146 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	SNTG1	Q9NSN8	517 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	GRHPR	Q9UBQ7	328 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	MAD2L2	Q9UI95	211 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	RCOR1	Q9UKL0	485 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	TNFSF13B	Q9Y275	285 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	COMMD3-BMI1	R4GMX3	469 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483	CCDC171	Q6TFL3	1326 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483		A8MX80	341 aa		4.1	□□□□□ -1.75
CNOT2-231	ENST00000551483		H3BUI4	141 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms