RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.12□□□□□ -0.63
NEK3-203ENST00000551355 STK39Q9UEW8 545 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CYB561D2O14569 222 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 CYP26A1O43174 497 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 MED7O43513 233 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 AKR1B10O60218 316 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 CILPO75339 1184 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 UPP2O95045 317 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ODC1P11926 461 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 WARSP23381 471 aaKnown RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 ALDH7A1P49419 539 aaKnown RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 ZNF132P52740 706 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 KRT83P78385 493 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ARID5AQ03989 594 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 BMS1Q14692 1282 aaKnown RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 STILQ15468 1287 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 SPA17Q15506 151 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 C10orf76Q5T2E6 689 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 HGSNATQ68CP4 663 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 METTL23Q86XA0 190 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 RBBP8NLQ8NC74 664 aaPredicted RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 KAT5Q92993 513 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ZNF689Q96CS4 500 aaPredicted RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ARID3AQ99856 593 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 HAUS4Q9H6D7 363 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ARHGAP20Q9P2F6 1191 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 POLIQ9UNA4 740 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
NEK3-203ENST00000551355 EPN1Q9Y6I3 576 aaPredicted RBP11.11□□□□□ -0.63
NEK3-203ENST00000551355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEK3-203ENST00000551355 ZBBXA8MT70 800 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 EIF3CLB5ME19 914 aaKnown RBP11.1□□□□□ -0.63
NEK3-203ENST00000551355 M0QZQ0 153 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 PPEF2O14830 753 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SPTLC1O15269 473 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 TADA2AO75478 443 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 DDHD2O94830 711 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 KIF4AO95239 1232 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 NDUFA10O95299 355 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 CYP11A1P05108 521 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 CYP11B1P15538 503 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 CD58P19256 250 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 TYMPP19971 482 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 CLCN1P35523 988 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 GNL1P36915 607 aaPredicted RBP11.1□□□□□ -0.63
NEK3-203ENST00000551355 EIF4A3P38919 411 aaKnown RBP11.1□□□□□ -0.63
NEK3-203ENST00000551355 OR1G1P47890 313 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 CDR2Q01850 454 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SOWAHAQ2M3V2 549 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SCARA5Q6ZMJ2 495 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 TRIM72Q6ZMU5 477 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 ADGRF2Q8IZF7 708 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 TMEM176AQ96HP8 235 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SUSD3Q96L08 255 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 YME1L1Q96TA2 773 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 EIF3CQ99613 913 aaKnown RBP11.1□□□□□ -0.63
NEK3-203ENST00000551355 CHP1Q99653 195 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 AGPAT1Q99943 283 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 OXCT2Q9BYC2 517 aaPredicted RBP11.1□□□□□ -0.63
NEK3-203ENST00000551355 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 INSL6Q9Y581 213 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 SLC4A7Q9Y6M7 1214 aa11.1□□□□□ -0.63
NEK3-203ENST00000551355 GOLGA6L9A6NEM1 432 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 GABRDO14764 452 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 NRP1O14786 923 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 SYN3O14994 580 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 GJB5O95377 273 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 LCA5LO95447 670 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 GALTP07902 379 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 CCDC175P0C221 793 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 VDRP11473 427 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 SYN1P17600 705 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 LAG3P18627 525 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 TNFAIP3P21580 790 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 PCSK1P29120 753 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 GNA15P30679 374 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 KIF11P52732 1056 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 CDH8P55286 799 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 DEFB103AP81534 67 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms