RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 BBOF1Q8ND07 529 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 FAM84AQ96KN4 292 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 ZBTB5O15062 677 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 PPP3CAQ08209 521 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 MIPOL1Q8TD10 442 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 EPS8L1Q8TE68 723 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 PSMC3IPQ9P2W1 217 aaPredicted RBP12.77□□□□□ -0.36
VDR-208ENST00000550325 PPM1HQ9ULR3 514 aa12.77□□□□□ -0.36
VDR-208ENST00000550325 EML1O00423 815 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 LPXNO60711 386 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.37
VDR-208ENST00000550325 MT-ND3P03897 115 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 PSMC4P43686 418 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 BPIFB4P59827 614 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 IRX4P78413 519 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 ASPHQ12797 758 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 CDC16Q13042 620 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 TFDP1Q14186 410 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 BBS9Q3SYG4 887 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 HYIQ5T013 277 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 PALM2Q8IXS6 379 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 NAT14Q8WUY8 206 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 TUBB6Q9BUF5 446 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 MXI1P50539 228 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 VAMP7P51809 220 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.37
VDR-208ENST00000550325 MAP7D3Q8IWC1 876 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.37
VDR-208ENST00000550325 DENND1AQ8TEH3 1009 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 PYROXD1Q8WU10 500 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 USP6NLQ92738 828 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 SYT11Q9BT88 431 aa12.77□□□□□ -0.37
VDR-208ENST00000550325 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 PRPF31Q8WWY3 499 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 CD101Q93033 1021 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 TTC25Q96NG3 672 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 NR1H4Q96RI1 486 aaPredicted RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 COMMD3-BMI1R4GMX3 469 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 SPECC1L-ADORA2AF8WAN1 911 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 TRAFD1O14545 582 aaPredicted RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 MAGEB2O15479 319 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 SUPT3HO75486 399 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 HIRAP54198 1017 aaPredicted RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 CDK16Q00536 496 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 SH2D4BQ5SQS7 431 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 PRPF39Q86UA1 669 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 SESTD1Q86VW0 696 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 RBM15BQ8NDT2 890 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 OXNAD1Q96HP4 312 aaPredicted RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 RANBP17Q9H2T7 1088 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 QTRT2Q9H974 415 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 KANSL3Q9P2N6 904 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 PIK3CDO00329 1044 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 TRIP10Q15642 601 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 GSTA3Q16772 222 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 ATP13A4Q4VNC1 1196 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
VDR-208ENST00000550325 GSTCDQ8NEC7 633 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 CBWD1Q9BRT8 395 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 GTF3C4Q9UKN8 822 aa12.76□□□□□ -0.37
VDR-208ENST00000550325 FAM86B1E9PN63 330 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
VDR-208ENST00000550325 TRPA1O75762 1119 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 FAM86B2P0C5J1 330 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 GAP43P17677 238 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 MUTP22033 750 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 GALK1P51570 392 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 TMEM62Q0P6H9 643 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 C3orf62Q6ZUJ4 267 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 CENPUQ71F23 418 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 CTAGE3PQ8IX95 158 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 C12orf50Q8NA57 414 aaPredicted RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 ANKRD2Q9GZV1 360 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 MIS12Q9H081 205 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 ZSCAN9O15535 394 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms