RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
CUX1-214ENST00000550008 INSRRP14616 1297 aa15.81■□□□□ 0.12
CUX1-214ENST00000550008 KIAA1841Q6NSI8 718 aa15.81■□□□□ 0.12
CUX1-214ENST00000550008 FAM71DQ8N9W8 422 aa15.81■□□□□ 0.12
CUX1-214ENST00000550008 LNX1Q8TBB1 728 aaPredicted RBP15.81■□□□□ 0.12
CUX1-214ENST00000550008 ZNF473Q8WTR7 871 aaKnown RBP15.81■□□□□ 0.12
CUX1-214ENST00000550008 SEMA4AQ9H3S1 761 aa15.81■□□□□ 0.12
CUX1-214ENST00000550008 SALL4Q9UJQ4 1053 aa15.81■□□□□ 0.12
CUX1-214ENST00000550008 IQANK1A0A1B0GTG1 560 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 KRT37O76014 449 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 CAV1Q03135 178 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 METTL7BQ6UX53 244 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 VPS11Q9H270 941 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 CYP39A1Q9NYL5 469 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 H0Y3Z8 333 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 NKRFO15226 690 aaKnown RBP eCLIP15.8■□□□□ 0.122e-6■■□□□ 12.1
CUX1-214ENST00000550008 MAGEB2O15479 319 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 GZMAP12544 262 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 PAN2Q504Q3 1202 aaKnown RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 DDX56Q9NY93 547 aaKnown RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 BAZ2AQ9UIF9 1905 aaKnown RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 IGKV6D-41A0A0C4DH26 115 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 LLGL2Q6P1M3 1020 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 ANO5Q75V66 913 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 PID1Q7Z2X4 250 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 ACTRT1Q8TDG2 376 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 E2F8A0AVK6 867 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 CAND2O75155 1236 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 EGFRP00533 1210 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 ITIH2P19823 946 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 SNRPFP62306 86 aaKnown RBP15.8■□□□□ 0.12
CUX1-214ENST00000550008 IRF2BP2Q7Z5L9 587 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 MICAL1Q8TDZ2 1067 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.8■□□□□ 0.123e-6■□□□□ 8.8
CUX1-214ENST00000550008 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
CUX1-214ENST00000550008 BNIP3LO60238 219 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 GSTA1P08263 222 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 GSTA2P09210 222 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 GNAT1P11488 350 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 UBA1P22314 1058 aaKnown RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 ACTN3Q08043 901 aaPredicted RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 PRPSAP1Q14558 356 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 GNASQ5JWF2 1037 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 SRLQ86TD4 932 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 ATP11CQ8NB49 1132 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 EPS8L1Q8TE68 723 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 ZNF606Q8WXB4 792 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 NID2Q14112 1375 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 TMEM120BA0PK00 339 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 PJA2O43164 708 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 STAG3L1P0CL83 205 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 GARSP41250 739 aaKnown RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 MAGEA4P43358 317 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 MAGEA9P43362 315 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 PIGHQ14442 188 aaPredicted RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 ARHGAP24Q8N264 748 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 RYBPQ8N488 228 aaPredicted RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 EPN3Q9H201 632 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 TRABDQ9H4I3 376 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 MAP3K20Q9NYL2 800 aaKnown RBP15.79■□□□□ 0.12
CUX1-214ENST00000550008 LRFN2Q9ULH4 789 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 ARFGEF2Q9Y6D5 1785 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 CCNE2O96020 404 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 SRGAP2BP0DMP2 458 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 EPHX2P34913 555 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 ARL13BQ3SXY8 428 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 CLMNQ96JQ2 1002 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 OSMRQ99650 979 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 TMEM121Q9BTD3 319 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 SETD4Q9NVD3 440 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 CPA4Q9UI42 421 aa15.79■□□□□ 0.12
CUX1-214ENST00000550008 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
CUX1-214ENST00000550008 ATP9BO43861 1147 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 AMPD2Q01433 879 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 RAB3IL1Q8TBN0 382 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 AGR3Q8TD06 166 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 CGRRF1Q99675 332 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 BEGAINQ9BUH8 593 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 M0R2N6 131 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 LAMC2Q13753 1193 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 GOLGA7BQ2TAP0 167 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 FBXW10Q5XX13 1052 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 MPZL3Q6UWV2 235 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 GABPB2Q8TAK5 448 aaPredicted RBP15.78■□□□□ 0.12
CUX1-214ENST00000550008 FGFR1OP2Q9NVK5 253 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 TLK1Q9UKI8 766 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 POLIQ9UNA4 740 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 PCDHGC5Q9Y5F6 944 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 NOL4O94818 638 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 DCAF6Q58WW2 860 aa15.78■□□□□ 0.12
CUX1-214ENST00000550008 XPO6Q96QU8 1125 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms