RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 CFAP54Q96N23 3096 aa13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 MYO15AQ9UKN7 3530 aa13.17□□□□□ -0.3
TUBA1B-205ENST00000549870 DOCK8Q8NF50 2099 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 TRAPPC3O43617 180 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 POU2F2P09086 479 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 PDIA5Q14554 519 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 UROC1Q96N76 676 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 FOXQ1Q9C009 403 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 STIM2Q9P246 746 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 KCNH3Q9ULD8 1083 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 TNFSF13BQ9Y275 285 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 CDY1Q9Y6F8 540 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 R4GN57 208 aa13.16□□□□□ -0.3
TUBA1B-205ENST00000549870 CCDC169A6NNP5 214 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 CAPN5O15484 640 aaPredicted RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 LMNAP02545 664 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 SP9P0CG40 484 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 GLULP15104 373 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 BRCC3P46736 316 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 NPTX2P47972 431 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 PABPC1LQ4VXU2 614 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 XKR4Q5GH76 650 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 ALDH16A1Q8IZ83 802 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 PJA1Q8NG27 643 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 PTPRHQ9HD43 1115 aa13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 NOL7Q9UMY1 257 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-205ENST00000549870 KANSL1LA0AUZ9 987 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 I3L4J1 428 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 LRRN2O75325 713 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ID4P47928 161 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 PEX3P56589 373 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 OSTNP61366 133 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 TMEM214Q6NUQ4 689 aaKnown RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 LINC00528Q8N1L1 170 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 CEP120Q8N960 986 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 IGSF22Q8N9C0 903 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 CDT1Q9H211 546 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 DNM3Q9UQ16 869 aa13.14□□□□□ -0.31
TUBA1B-205ENST00000549870 E9PMD0 336 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 HIP1RO75146 1068 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 RHOP08100 348 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MAPK1P28482 360 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 TOB1P50616 345 aaPredicted RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 PFKPQ01813 784 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 PRKCQQ04759 706 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MLF2Q15773 248 aaPredicted RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 DAW1Q8N136 415 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MCRS1Q96EZ8 462 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 TARS2Q9BW92 718 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 ARHGAP28Q9P2N2 729 aa13.13□□□□□ -0.31
TUBA1B-205ENST00000549870 MRPS23Q9Y3D9 190 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms