RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 L1RE1Q9UN81 338 aa22.63■■□□□ 1.21
CACNB3-210ENST00000548874 TSC2P49815 1807 aa22.63■■□□□ 1.21
CACNB3-210ENST00000548874 PES1O00541 588 aaKnown RBP22.62■■□□□ 1.21
CACNB3-210ENST00000548874 HUS1O60921 280 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 ASPAP45381 313 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 GLUD2P49448 558 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 MRPL58Q14197 206 aaKnown RBP22.62■■□□□ 1.21
CACNB3-210ENST00000548874 GRIN2CQ14957 1233 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 EXOC3L4Q17RC7 722 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 SOWAHAQ2M3V2 549 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 WDR44Q5JSH3 913 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 APPL2Q8NEU8 664 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 PIK3R5Q8WYR1 880 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 CRACR2AQ9BSW2 395 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 NIF3L1Q9GZT8 377 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 NXF1Q9UBU9 619 aaKnown RBP22.62■■□□□ 1.21
CACNB3-210ENST00000548874 DSEQ9UL01 958 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 POLIQ9UNA4 740 aa22.62■■□□□ 1.21
CACNB3-210ENST00000548874 LILRB3O75022 631 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 SERPINC1P01008 464 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 URODP06132 367 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 FAM163BP0C2L3 166 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 SLC9A1P19634 815 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 PON1P27169 355 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TNNC1P63316 161 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 KCNMA1Q12791 1236 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 FKBP15Q5T1M5 1219 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 WSCD1Q658N2 575 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 DPY19L2P1Q6NXN4 242 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TRIM65Q6PJ69 517 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 PDCL2Q8N4E4 241 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 SPATA18Q8TC71 538 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TATDN2Q93075 761 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 NAP1L5Q96NT1 182 aaPredicted RBP22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TCF25Q9BQ70 676 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 BCO2Q9BYV7 579 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 PRDM12Q9H4Q4 367 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TIMM13Q9Y5L4 95 aaPredicted RBP22.61■■□□□ 1.21
CACNB3-210ENST00000548874 IRAK3Q9Y616 596 aa22.61■■□□□ 1.21
CACNB3-210ENST00000548874 TACC1O75410 805 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 OAZ2O95190 189 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 P4HA1P13674 534 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 IRS1P35568 1242 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 FXR1P51114 621 aaKnown RBP eCLIP22.6■■□□□ 1.21
CACNB3-210ENST00000548874 PTPN14Q15678 1187 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 FILIP1LQ4L180 1135 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 VARS2Q5ST30 1063 aaKnown RBP22.6■■□□□ 1.21
CACNB3-210ENST00000548874 PDE12Q6L8Q7 609 aaKnown RBP22.6■■□□□ 1.21
CACNB3-210ENST00000548874 KIAA1841Q6NSI8 718 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 TMC7Q7Z402 723 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 CEP57Q86XR8 500 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 TMEM86AQ8N2M4 240 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 LNX1Q8TBB1 728 aaPredicted RBP22.6■■□□□ 1.21
CACNB3-210ENST00000548874 KBTBD7Q8WVZ9 684 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 NT5C1BQ96P26 610 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 MMS19Q96T76 1030 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 SMYD3Q9H7B4 428 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 SIX2Q9NPC8 291 aa22.6■■□□□ 1.21
CACNB3-210ENST00000548874 NGRNQ9NPE2 291 aaKnown RBP22.6■■□□□ 1.21
CACNB3-210ENST00000548874 GABRDO14764 452 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 TEX33O43247 280 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 UBXN1Q04323 297 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 YWHAHQ04917 246 aaPredicted RBP22.59■■□□□ 1.21
CACNB3-210ENST00000548874 NR1I3Q14994 352 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 PDXDC1Q6P996 788 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 ANKS3Q6ZW76 656 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 ADGRF2Q8IZF7 708 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 AUTS2Q8WXX7 1259 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 RIN2Q8WYP3 895 aaPredicted RBP22.59■■□□□ 1.21
CACNB3-210ENST00000548874 MRPL38Q96DV4 380 aaKnown RBP22.59■■□□□ 1.21
CACNB3-210ENST00000548874 ERGIC2Q96RQ1 377 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 SDCBP2Q9H190 292 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 RXFP1Q9HBX9 757 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 ENTPD7Q9NQZ7 604 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 MRPL17Q9NRX2 175 aaKnown RBP22.59■■□□□ 1.21
CACNB3-210ENST00000548874 SSX2IPQ9Y2D8 614 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 SIK3Q9Y2K2 1263 aa22.59■■□□□ 1.21
CACNB3-210ENST00000548874 TBC1D4O60343 1298 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 CLSTN1O94985 981 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 WARSP23381 471 aaKnown RBP22.58■■□□□ 1.21
CACNB3-210ENST00000548874 LRMPQ12912 555 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 SMC1AQ14683 1233 aaKnown RBP22.58■■□□□ 1.21
CACNB3-210ENST00000548874 PTPROQ16827 1216 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 OVOS1Q6IE37 1185 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 PHLDB3Q6NSJ2 640 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 PRSS55Q6UWB4 352 aaPredicted RBP22.58■■□□□ 1.21
CACNB3-210ENST00000548874 SCARA5Q6ZMJ2 495 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 OSTM1Q86WC4 334 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 METTL23Q86XA0 190 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 ARHGEF19Q8IW93 802 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 MRPL43Q8N983 215 aaKnown RBP22.58■■□□□ 1.21
CACNB3-210ENST00000548874 MRPL45Q9BRJ2 306 aaKnown RBP22.58■■□□□ 1.21
CACNB3-210ENST00000548874 CYP3A43Q9HB55 503 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 LMCD1Q9NZU5 365 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 MTRRQ9UBK8 725 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 PCDHGC5Q9Y5F6 944 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 BACE2Q9Y5Z0 518 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 ATG2AQ2TAZ0 1938 aa22.58■■□□□ 1.21
CACNB3-210ENST00000548874 C2orf71A6NGG8 1288 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms