RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 MCF2LO15068 1137 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 GMPSP49915 693 aaPredicted RBP14.96□□□□□ -0.01
CACNB3-209ENST00000548860 ATXN3P54252 364 aaPredicted RBP14.96□□□□□ -0.01
CACNB3-209ENST00000548860 CUL2Q13617 745 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 HIF1AQ16665 826 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 IL31Q6EBC2 164 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
CACNB3-209ENST00000548860 PRPF31Q8WWY3 499 aaKnown RBP14.96□□□□□ -0.01
CACNB3-209ENST00000548860 ADPGKQ9BRR6 497 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 SMYD3Q9H7B4 428 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 POLIQ9UNA4 740 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 FIS1Q9Y3D6 152 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 PCDHA3Q9Y5H8 950 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
CACNB3-209ENST00000548860 CHD4Q14839 1912 aa14.96□□□□□ -0.02
CACNB3-209ENST00000548860 KDSRQ06136 332 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ALCAMQ13740 583 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 CLEC16AQ2KHT3 1053 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ZNF667Q5HYK9 610 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 GLRA4Q5JXX5 417 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ERMARDQ5T6L9 678 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ZDHHC24Q6UX98 284 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 MREGQ8N565 214 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 GLIS1Q8NBF1 620 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 PPARGC1AQ9UBK2 798 aaKnown RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 C2orf71A6NGG8 1288 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ZNF862O60290 1169 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 PPFIA2O75334 1257 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ECHS1P30084 290 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 LY6KQ17RY6 165 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ZDHHC14Q8IZN3 488 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 FEZF2Q8TBJ5 459 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 RAD23BP54727 409 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 EFTUD2Q15029 972 aaKnown RBP eCLIP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 CNGA2Q16280 664 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ARMC9Q7Z3E5 817 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 FAM71AQ8IYT1 594 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ACTL9Q8TC94 416 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 CCDC124Q96CT7 223 aaKnown RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 SENP7Q9BQF6 1050 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 RAB6BQ9NRW1 208 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ARL2BPQ9Y2Y0 163 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 WDR46O15213 610 aaKnown RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ANP32DO95626 131 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 RBP3P10745 1247 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 SFNP31947 248 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 ALDH5A1P51649 535 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 EIF3EP60228 445 aaKnown RBP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 TFDP1Q14186 410 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 DCLK3Q9C098 648 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.02
CACNB3-209ENST00000548860 SLC12A6Q9UHW9 1150 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 NUB1Q9Y5A7 615 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 RPTORQ8N122 1335 aa14.95□□□□□ -0.02
CACNB3-209ENST00000548860 STRCQ7RTU9 1775 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 PAPPAQ13219 1627 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 FAM47DPA6NHR8 397 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 POLR2BP30876 1174 aaKnown RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 GBP1P32455 592 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 DSG3P32926 999 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 DCAF15Q66K64 600 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 LONP2Q86WA8 852 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 RTKN2Q8IZC4 609 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 DCLK2Q8N568 766 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 P3H4Q92791 437 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 ANKRD36BP1Q96IX9 119 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 GRHL1Q9NZI5 618 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 ZFP69BQ9UJL9 534 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 ENO4A6NNW6 628 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 PHBP35232 272 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 TMPRSS15P98073 1019 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 OTUD4Q01804 1114 aaKnown RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 BMPR2Q13873 1038 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 PSMD6Q15008 389 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 TDRD10Q5VZ19 366 aaKnown RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 AGAP3Q96P47 875 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 RPS6KC1Q96S38 1066 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 AS3MTQ9HBK9 375 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 CST3P01034 146 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 CTCFP49711 727 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 TRMT10CQ7L0Y3 403 aaKnown RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 SPATA18Q8TC71 538 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 NUDCD1Q96RS6 583 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 NCAPGQ9BPX3 1015 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
CACNB3-209ENST00000548860 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 CSADQ9Y600 493 aa14.94□□□□□ -0.02
CACNB3-209ENST00000548860 I3L4J1 428 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 TXNRD3NBQ6F5E7 133 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 OR6B3Q8NGW1 331 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 SHC3Q92529 594 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms