RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SYTL5Q8TDW5 730 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 STK32AQ8WU08 396 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 C10orf82Q8WW14 230 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 ZNF622Q969S3 477 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 C11orf70Q9BRQ4 267 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CYLDQ9NQC7 956 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 PARVAQ9NVD7 372 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 DNPEPQ9ULA0 475 aa10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CORO1CQ9ULV4 474 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-205ENST00000548573 CCDC189A1A4V9 331 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 POC1B-GALNT4F8VUJ3 575 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 ATP2A1O14983 1001 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 EXTL3O43909 919 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 ZWINTO95229 277 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 CCNE2O96020 404 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 C4BPAP04003 597 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 T-ENOLP0DO92 83 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 PECAM1P16284 738 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 CA4P22748 312 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 RPA3P35244 121 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 ARSEP51690 589 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 PSMD6Q15008 389 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 TAF11Q15544 211 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 C2CD6Q53TS8 623 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SLC45A4Q5BKX6 768 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 CENPUQ71F23 418 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 FAM13CQ8NE31 585 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 CFAP61Q8NHU2 1237 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SLC7A6OSQ96CW6 309 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 NAF1Q96HR8 494 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SENP7Q9BQF6 1050 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 FAM213AQ9BRX8 229 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 PHACTR1Q9C0D0 580 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 FHDC1Q9C0D6 1143 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SLCO1B3Q9NPD5 702 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 PSMC3IPQ9P2W1 217 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 HAO1Q9UJM8 370 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 GRID1Q9ULK0 1009 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 ZNF148Q9UQR1 794 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 USTQ9Y2C2 406 aa10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-205ENST00000548573 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 H0YCG3 227 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 C2CD2LO14523 706 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 ATP9AO75110 1047 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 ZBED4O75132 1171 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 TPBGLP0DKB5 382 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 GNA15P30679 374 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 PTPN7P35236 360 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 CUL2Q13617 745 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 PGM5Q15124 567 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 GLIS1Q8NBF1 620 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SPDL1Q96EA4 605 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SLITRK1Q96PX8 696 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 TBC1D10AQ9BXI6 508 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 TLE6Q9H808 572 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 KIF9Q9HAQ2 790 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SAR1AQ9NR31 198 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 LNPEPQ9UIQ6 1025 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 CNTN6Q9UQ52 1028 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 ITGAVP06756 1048 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 PIK3CAP42336 1068 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 GPS1Q13098 491 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 OASLQ15646 514 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SLC1A5Q15758 541 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 RNASEH2BQ5TBB1 312 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 HHATQ5VTY9 493 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 CAPRIN2Q6IMN6 1127 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 STYK1Q6J9G0 422 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 TRMT1LQ7Z2T5 733 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 PCGF5Q86SE9 256 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 SEPT12Q8IYM1 358 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 C4orf33Q8N1A6 199 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 MCPH1Q8NEM0 835 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 FBXO41Q8TF61 875 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 NKD2Q969F2 451 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 TAAR1Q96RJ0 339 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 FNBP1Q96RU3 617 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 VPS37BQ9H9H4 285 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 PCDH9Q9HC56 1237 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 NKX1-2Q9UD57 310 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 CNTNAP1P78357 1384 aa10.43□□□□□ -0.74
SMARCD1-205ENST00000548573 A6NHS1 94 aa10.42□□□□□ -0.74
SMARCD1-205ENST00000548573 DGAT1O75907 488 aa10.42□□□□□ -0.74
SMARCD1-205ENST00000548573 LMNAP02545 664 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-205ENST00000548573 CFHP08603 1231 aa10.42□□□□□ -0.74
SMARCD1-205ENST00000548573 ZSCAN5DPP0CG00 497 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms