RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 RTKNQ9BST9 563 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 DNAJC25Q9H1X3 360 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 GREB1Q4ZG55 1949 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 WDR87Q6ZQQ6 2873 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 CACNA1AO00555 2505 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 M0QZQ0 153 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 GDF9O60383 454 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 EPHA5P54756 1037 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 WDR44Q5JSH3 913 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 GPR158Q5T848 1215 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 TXNDC11Q6PKC3 985 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 TMC8Q8IU68 726 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 GPR88Q9GZN0 384 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 SMG9Q9H0W8 520 aaKnown RBP13□□□□□ -0.33
TRAFD1-205ENST00000548277 C17orf75Q9HAS0 396 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 TRPV5Q9NQA5 729 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 CACNA1BQ00975 2339 aa13□□□□□ -0.33
TRAFD1-205ENST00000548277 OBSL1O75147 1896 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 FRYLO94915 3013 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 TTC26A0AVF1 554 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 ARNTLO00327 626 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 AXIN1O15169 862 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CHADO15335 359 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 OAZ2O95190 189 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CLTAP09496 248 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 PLA2G4BP0C869 781 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 GABRR2P28476 465 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 LRPAP1P30533 357 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 PXNP49023 591 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 LIG4P49917 911 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CYP4F8P98187 520 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 PPP2R3AQ06190 1150 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 MCL1Q07820 350 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 TNK2Q07912 1038 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 GPR17Q13304 367 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CCDC6Q16204 474 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 PPM1JQ5JR12 505 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 OVOS1Q6IE37 1185 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 GAREM2Q75VX8 874 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CEP68Q76N32 757 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SPEM1Q8N4L4 309 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 LEMD2Q8NC56 503 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 GIPC2Q8TF65 315 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SPIRE2Q8WWL2 714 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 ZHX3Q9H4I2 956 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 RPF1Q9H9Y2 349 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 UBQLN1Q9UMX0 589 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-205ENST00000548277 TSC2P49815 1807 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 RETP07949 1114 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 PLD1Q13393 1074 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 LRRC32Q14392 662 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 ZBTB6Q15916 424 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 C8orf34Q49A92 452 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 JADE1Q6IE81 842 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 SENP8Q96LD8 212 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 KIF2CQ99661 725 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 C8orf33Q9H7E9 229 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 TPRP12270 2363 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-205ENST00000548277 OR6C75A6NL08 312 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 K7ESF4 209 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 LAD1O00515 517 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 CTHP32929 405 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 PRPHP41219 470 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 SLC12A3P55017 1021 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 TAF12Q16514 161 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms