RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 SLC39A5Q6ZMH5 540 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 ECHDC2Q86YB7 292 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 RFFLQ8WZ73 363 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 SEPT8Q92599 483 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 MMS19Q96T76 1030 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 IRX2Q9BZI1 471 aaPredicted RBP13.2□□□□□ -0.3
RAB5B-204ENST00000548068 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
RAB5B-204ENST00000548068 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
RAB5B-204ENST00000548068 BARX2Q9UMQ3 279 aaPredicted RBP13.2□□□□□ -0.3
RAB5B-204ENST00000548068 SCN1AP35498 2009 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 INPPL1O15357 1258 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 CILPO75339 1184 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 MOCS3O95396 460 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 ABL1P00519 1130 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 FTLP02792 175 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-204ENST00000548068 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
RAB5B-204ENST00000548068 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
RAB5B-204ENST00000548068 GJA8P48165 433 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 GPC5P78333 572 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 MBTPS1Q14703 1052 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 STILQ15468 1287 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 ACAD10Q6JQN1 1059 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 UNC93AQ86WB7 457 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 SYCE1Q8N0S2 351 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 UROC1Q96N76 676 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 GAD1Q99259 594 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-204ENST00000548068 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 TFR2Q9UP52 801 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 JRKLQ9Y4A0 524 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
RAB5B-204ENST00000548068 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 C9IYK1 514 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 HUS1O60921 280 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 URI1O94763 535 aaPredicted RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 CYP1A1P04798 512 aaPredicted RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 CD19P15391 556 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ABCB4P21439 1286 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 LBX1P52954 281 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 TERF1P54274 439 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 CENPCQ03188 943 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 LIN9Q5TKA1 542 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 TMEM35BQ8NCS4 154 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 MSANTD4Q8NCY6 345 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 URGCPQ8TCY9 931 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ZNF606Q8WXB4 792 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 LPPQ93052 612 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 VCPIP1Q96JH7 1222 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 NT5C1AQ9BXI3 368 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ACP6Q9NPH0 428 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 GTF3C4Q9UKN8 822 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
RAB5B-204ENST00000548068 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 PPEF2O14830 753 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 BUB1O43683 1085 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 VDRP11473 427 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 UNGP13051 313 aaPredicted RBP13.17□□□□□ -0.3
RAB5B-204ENST00000548068 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
RAB5B-204ENST00000548068 SCNN1GP51170 649 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
RAB5B-204ENST00000548068 RAD23BP54727 409 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 CDH8P55286 799 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 NOMO3P69849 1222 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 FAM189BP81408 668 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 SOX4Q06945 474 aaPredicted RBP13.17□□□□□ -0.3
RAB5B-204ENST00000548068 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
RAB5B-204ENST00000548068 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms