RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 CHMP4CQ96CF2 233 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 PDLIM2Q96JY6 352 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 KMT5AQ9NQR1 393 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 DDX56Q9NY93 547 aaKnown RBP3.05□□□□□ -1.92
CEP290-204ENST00000547926 SPEF1Q9Y4P9 236 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CEP290-204ENST00000547926 CCDC187A0A096LP49 1063 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SGTAO43765 313 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 ALDH1L1O75891 902 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 CD1AP06126 327 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 CBSLP0DN79 551 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 FGFR4P22455 802 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 CBSP35520 551 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 TLE1Q04724 770 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SLFN5Q08AF3 891 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 TBC1D15Q8TC07 691 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 NSUN6Q8TEA1 469 aaKnown RBP3.04□□□□□ -1.92
CEP290-204ENST00000547926 HOOK2Q96ED9 719 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 TLR10Q9BXR5 811 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 VSX1Q9NZR4 365 aaPredicted RBP3.04□□□□□ -1.92
CEP290-204ENST00000547926 HSFX1Q9UBD0 423 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 IP6K2Q9UHH9 426 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SLC45A2Q9UMX9 530 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SHROOM4Q9ULL8 1493 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 PDGFRBP09619 1106 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SPATA31D3P0C874 917 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 CKBP12277 381 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 FCER1AP12319 257 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 ALAS1P13196 640 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 PDCP20941 246 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 IGBP1P78318 339 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 SSBP2P81877 361 aaPredicted RBP3.04□□□□□ -1.92
CEP290-204ENST00000547926 SRSF7Q16629 238 aaKnown RBP eCLIP3.04□□□□□ -1.92
CEP290-204ENST00000547926 KHDC1Q4VXA5 237 aaKnown RBP3.04□□□□□ -1.92
CEP290-204ENST00000547926 UTP14CQ5TAP6 766 aaKnown RBP3.04□□□□□ -1.92
CEP290-204ENST00000547926 SPATA31D4Q6ZUB0 917 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 TMEM132CQ8N3T6 1108 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 FITM2Q8N6M3 262 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 NACC2Q96BF6 587 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 AASDHPPTQ9NRN7 309 aa3.04□□□□□ -1.92
CEP290-204ENST00000547926 ZNF521Q96K83 1311 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 CDKL5O76039 1030 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 HAUS5O94927 633 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 AGFG2O95081 481 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 IL33O95760 270 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 GPANK1O95872 356 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 BMP15O95972 392 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 MALP21145 153 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 FDXRP22570 491 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 CXADRP78310 365 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 MCL1Q07820 350 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 SNAPC2Q13487 334 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 RAB39AQ14964 217 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 TTF1Q15361 905 aaPredicted RBP3.03□□□□□ -1.92
CEP290-204ENST00000547926 PABPC1LQ4VXU2 614 aaKnown RBP3.03□□□□□ -1.92
CEP290-204ENST00000547926 TMEM240Q5SV17 173 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 ZNF626Q68DY1 528 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.03□□□□□ -1.92
CEP290-204ENST00000547926 GADL1Q6ZQY3 521 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 IL17RDQ8NFM7 739 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 ADAMTS15Q8TE58 950 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 HSPBAP1Q96EW2 488 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 FCRL4Q96PJ5 515 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 GTPBP4Q9BZE4 634 aaKnown RBP3.03□□□□□ -1.92
CEP290-204ENST00000547926 RNPEPQ9H4A4 650 aa3.03□□□□□ -1.92
CEP290-204ENST00000547926 NT5C1B-RDH14C9J2C7 533 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 F2RL2O00254 374 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 HLA-DOAP06340 250 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 POU2F2P09086 479 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 MTX3Q5HYI7 312 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 USP45Q70EL2 814 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 TTC7BQ86TV6 843 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 RAVER1Q8IY67 606 aaKnown RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 PRR18Q8N4B5 295 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 TMIEQ8NEW7 156 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 NUP133Q8WUM0 1156 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 RNF31Q96EP0 1072 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 KLHL32Q96NJ5 620 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 RHOBTB2Q9BYZ6 727 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 REXO4Q9GZR2 422 aaKnown RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 TYW1Q9NV66 732 aaKnown RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 CFAP20Q9Y6A4 193 aaKnown RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 NOTCH4Q99466 2003 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 PROP1O75360 226 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 SLC43A1O75387 559 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 ABLIM3O94929 683 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 PF4V1P10720 104 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 KRT10P13645 584 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 RAB27AP51159 221 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 CYP2A13Q16696 494 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 ATP2B3Q16720 1220 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 PPP4R3AQ6IN85 833 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 SLC4A10Q6U841 1118 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 VGLL2Q8N8G2 317 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 Q8NA96 180 aa3.02□□□□□ -1.93
CEP290-204ENST00000547926 NSUN7Q8NE18 718 aaKnown RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 NLGN4YQ8NFZ3 816 aaPredicted RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 RTFDC1Q9BY42 306 aaPredicted RBP3.02□□□□□ -1.93
CEP290-204ENST00000547926 TCF7L1Q9HCS4 588 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms