RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SEMA4CQ9C0C4 833 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 ASB6Q9NWX5 421 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 MAGEC2Q9UBF1 373 aaPredicted RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 PRSS50Q9UI38 385 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 LRPPRCP42704 1394 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 KIF15Q9NS87 1388 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 CDC42BPGQ6DT37 1551 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 IQGAP3Q86VI3 1631 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 KIF1AQ12756 1690 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 WIPF3A6NGB9 483 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 TMEM127O75204 238 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 F2P00734 622 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 FGFR4P22455 802 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 GCSHP23434 173 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 FOLR3P41439 243 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 KPNA1P52294 538 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 SQSTM1Q13501 440 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF460Q14592 562 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 CCDC144BQ3MJ40 725 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 FAM180AQ6UWF9 173 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 CRELD2Q6UXH1 353 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 FRMD7Q6ZUT3 714 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 MED25Q71SY5 747 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 GCC1Q96CN9 775 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 CEP95Q96GE4 821 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF496Q96IT1 587 aaPredicted RBP3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 PHACTR3Q96KR7 559 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 MED15Q96RN5 788 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ADGRE3Q9BY15 652 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 PIF1Q9H611 641 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ZSWIM4Q9H7M6 989 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 KANSL2Q9H9L4 492 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 MOCS1Q9NZB8 636 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 WNT6Q9Y6F9 365 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 RPTORQ8N122 1335 aa3.34□□□□□ -1.87
DEPDC4-204ENST00000547823 ADCY9O60503 1353 aa3.34□□□□□ -1.88
DEPDC4-204ENST00000547823 RRBP1Q9P2E9 1410 aaKnown RBP3.34□□□□□ -1.88
DEPDC4-204ENST00000547823 COL24A1Q17RW2 1714 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 ARHGEF28Q8N1W1 1705 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 PRSS38A1L453 326 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CXorf49A8MYA2 514 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 RFPL3O75679 317 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 IGKV2-30P06310 120 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CTSSP25774 331 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 LLGL1Q15334 1064 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CYP2A13Q16696 494 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 MST1LQ2TV78 715 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 MFSD14BQ5SR56 506 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 KIAA0895LQ68EN5 471 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 SYNPOQ8N3V7 929 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 MRFAP1L1Q96HT8 127 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CLUHP3Q96NS8 147 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 EVLQ9UI08 416 aaPredicted RBP3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 MTO1Q9Y2Z2 717 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CDY2AQ9Y6F7 541 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 CCDC144AA2RUR9 1427 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 TNS3Q68CZ2 1445 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 PEAK1Q9H792 1746 aa3.33□□□□□ -1.88
DEPDC4-204ENST00000547823 GCOM1H8Y6P7 765 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 TRIM38O00635 465 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 MPPED1O15442 326 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 POMCP01189 267 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 IL2RBP14784 551 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 PTPN7P35236 360 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 CTCFP49711 727 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 CCT4P50991 539 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 MANFP55145 182 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 TUBA4AP68366 448 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 DSG1Q02413 1049 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 FCRLBQ6BAA4 426 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 ABHD15Q6UXT9 468 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 KRT28Q7Z3Y7 464 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 SLC41A1Q8IVJ1 513 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 C16orf71Q8IYS4 520 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 SH3TC2Q8TF17 1288 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 ANO3Q9BYT9 981 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 UNKLQ9H9P5 680 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 BCO1Q9HAY6 547 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 CPNE5Q9HCH3 593 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 RRP7BPQ9NSQ0 103 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 PPP2R3BQ9Y5P8 575 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 SPATA31A1Q5TZJ5 1347 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 DHX57Q6P158 1386 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 PRAG1Q86YV5 1406 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 FMN2Q9NZ56 1722 aa3.32□□□□□ -1.88
DEPDC4-204ENST00000547823 PARP4Q9UKK3 1724 aaKnown RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 CRYBG1Q9Y4K1 1723 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 E9PCH4 1651 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 TOPAZ1Q8N9V7 1692 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 HFM1A2PYH4 1435 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 TRGV11A0A075B6L2 103 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 MANSC4A6NHS7 340 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 TEX33O43247 280 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 RAB11FIP3O75154 756 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 ALAS1P13196 640 aa3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 ALOX15P16050 662 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 POU3F2P20265 443 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-204ENST00000547823 GRIA3P42263 894 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms