RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 CASP8Q14790 479 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 PSMD6Q15008 389 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 PALB2Q86YC2 1186 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 HELQQ8TDG4 1101 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 RUBCNQ92622 972 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 SCLT1Q96NL6 688 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 FAM49AQ9H0Q0 323 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 PRMT7Q9NVM4 692 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 STXBP5LQ9Y2K9 1186 aa17.71■□□□□ 0.43
CHMP1A-204ENST00000547687 FAM189A1O60320 539 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 PROZP22891 400 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 RFC2P35250 354 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 TNFSF9P41273 254 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 GABPB1Q06547 395 aaPredicted RBP17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 MCL1Q07820 350 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 LMBRD2Q68DH5 695 aaPredicted RBP17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 HDAC7Q8WUI4 952 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 SHC3Q92529 594 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 ZNF516Q92618 1163 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 FNBP1Q96RU3 617 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 THAP2Q9H0W7 228 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 OSGEPQ9NPF4 335 aa17.71■□□□□ 0.42
CHMP1A-204ENST00000547687 XIRP2A4UGR9 3374 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 CYP26A1O43174 497 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 AMHR2Q16671 573 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 FAM187BQ17R55 369 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 GLE1Q53GS7 698 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 EEF1DP3Q658K8 133 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 MPZL3Q6UWV2 235 aa17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 MTIF3Q9H2K0 278 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 DMGDHQ9UI17 866 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-204ENST00000547687 OGTO15294 1046 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 FTLP02792 175 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 PFKMP08237 780 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 GNAT1P11488 350 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 TNNI1P19237 187 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 RNASE9P60153 205 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 CLDN10P78369 228 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 SLC7A5Q01650 507 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 PTPROQ16827 1216 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 ZNF568Q3ZCX4 644 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 C8orf74Q6P047 294 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 NT5DC3Q86UY8 548 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 TIFAQ96CG3 184 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 ARHGEF26Q96DR7 871 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 HINFPQ9BQA5 517 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 ISCUQ9H1K1 167 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 NOCTQ9UK39 431 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 TNFSF13BQ9Y275 285 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 BUB1BO60566 1050 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 ATP2A2P16615 1042 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 CHRNB2P17787 502 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 MRPS25P82663 173 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 GPS2Q13227 327 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 NOP9Q86U38 636 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 USP38Q8NB14 1042 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 EPS8L1Q8TE68 723 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 DNAJB3Q8WWF6 145 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 TATDN2Q93075 761 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 PTPRJQ12913 1337 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 CNTNAP2Q9UHC6 1331 aa17.69■□□□□ 0.42
CHMP1A-204ENST00000547687 FAM170AA1A519 330 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 CEP104O60308 925 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 RTN2O75298 545 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 OAS2P29728 719 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 C15orf39Q6ZRI6 1047 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 ZNF410Q86VK4 478 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 SLC47A2Q86VL8 602 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 CEP120Q8N960 986 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 CPB2Q96IY4 423 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 ADAMTS10Q9H324 1103 aa17.68■□□□□ 0.42
CHMP1A-204ENST00000547687 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 GPR32O75388 356 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 CXCL10P02778 98 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 MYBL2P10244 700 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ARF4P18085 180 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 DEFB103AP81534 67 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 BRSK2Q8IWQ3 736 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 RHOT2Q8IXI1 618 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ACTRT1Q8TDG2 376 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 HES6Q96HZ4 224 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 CDT1Q9H211 546 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 STIM2Q9P246 746 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 CPSF3Q9UKF6 684 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms