RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SHDQ96IW2 340 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 ASB16Q96NS5 453 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 OXCT2Q9BYC2 517 aaPredicted RBP14.46□□□□□ -0.09
CPSF6-204ENST00000547486 ASB7Q9H672 318 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 MRPL44Q9H9J2 332 aaKnown RBP14.46□□□□□ -0.09
CPSF6-204ENST00000547486 DPP3Q9NY33 737 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 YIPF1Q9Y548 306 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 MORC2Q9Y6X9 1032 aaPredicted RBP14.46□□□□□ -0.09
CPSF6-204ENST00000547486 FAM170BA6NMN3 283 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 SOAT2O75908 522 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 VIPR2P41587 438 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 PFKPQ01813 784 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 PRKCQQ04759 706 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 GRM2Q14416 872 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 L1TD1Q5T7N2 865 aaKnown RBP14.45□□□□□ -0.1
CPSF6-204ENST00000547486 C1orf210Q8IVY1 113 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 EFCAB13Q8IY85 973 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 MAML2Q8IZL2 1156 aaPredicted RBP14.45□□□□□ -0.1
CPSF6-204ENST00000547486 ELMOD1Q8N336 334 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 SHKBP1Q8TBC3 707 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 NKD2Q969F2 451 aaPredicted RBP14.45□□□□□ -0.1
CPSF6-204ENST00000547486 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 ZSCAN16Q9H4T2 348 aaPredicted RBP14.45□□□□□ -0.1
CPSF6-204ENST00000547486 ZFP14Q9HCL3 533 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 TFIP11Q9UBB9 837 aaKnown RBP14.45□□□□□ -0.1
CPSF6-204ENST00000547486 SEL1LQ9UBV2 794 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 C2CD2Q9Y426 696 aa14.45□□□□□ -0.1
CPSF6-204ENST00000547486 NCANO14594 1321 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 PDCD11Q14690 1871 aaKnown RBP14.44□□□□□ -0.1
CPSF6-204ENST00000547486 FRMD3A2A2Y4 597 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 MTMR11A4FU01 709 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 CYB561D2O14569 222 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 CYP11A1P05108 521 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 ODC1P11926 461 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 IDEP14735 1019 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 GAP43P17677 238 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 TXLNAP40222 546 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 STAT6P42226 847 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 NASPP49321 788 aaPredicted RBP14.44□□□□□ -0.1
CPSF6-204ENST00000547486 POU5F1Q01860 360 aaKnown RBP14.44□□□□□ -0.1
CPSF6-204ENST00000547486 FZD5Q13467 585 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 TEAD2Q15562 447 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 VITQ6UXI7 678 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 CCDC73Q6ZRK6 1079 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 LRRTM3Q86VH5 581 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 TMC8Q8IU68 726 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 PDILTQ8N807 584 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 LINC00301Q8NCQ3 95 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 SMARCD2Q92925 531 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 RSPRY1Q96DX4 576 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 SAAL1Q96ER3 474 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 FAM84AQ96KN4 292 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 ACCSQ96QU6 501 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 FAM213AQ9BRX8 229 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 ZNF334Q9HCZ1 680 aaPredicted RBP14.44□□□□□ -0.1
CPSF6-204ENST00000547486 ASAH2Q9NR71 780 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 HEBP1Q9NRV9 189 aa14.44□□□□□ -0.1
CPSF6-204ENST00000547486 A0A1W2PRU2 124 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 GCNT3O95395 438 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 SP9P0CG40 484 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 PAX3P23760 479 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 EPHB3P54753 998 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 UBXN2BQ14CS0 331 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 POSTNQ15063 836 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 WSCD1Q658N2 575 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 ARMCX5Q6P1M9 558 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 TPRG1Q6ZUI0 275 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 DNAJB7Q7Z6W7 309 aaPredicted RBP14.43□□□□□ -0.1
CPSF6-204ENST00000547486 GPIHBP1Q8IV16 184 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 LEMD2Q8NC56 503 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 GLIS3Q8NEA6 775 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 ZSCAN18Q8TBC5 510 aaPredicted RBP14.43□□□□□ -0.1
CPSF6-204ENST00000547486 HPS3Q969F9 1004 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 PYM1Q9BRP8 204 aaKnown RBP14.43□□□□□ -0.1
CPSF6-204ENST00000547486 ZCWPW1Q9H0M4 648 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 TRPV4Q9HBA0 871 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 LTB4R2Q9NPC1 389 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 OLFML3Q9NRN5 406 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 R4GN57 208 aa14.43□□□□□ -0.1
CPSF6-204ENST00000547486 GOLGA8IPA6NC78 632 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 GOLGA8JA6NMD2 632 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 TULP1O00294 542 aaPredicted RBP14.42□□□□□ -0.1
CPSF6-204ENST00000547486 PRPF6O94906 941 aaKnown RBP14.42□□□□□ -0.1
CPSF6-204ENST00000547486 ALDH1A3P47895 512 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 TAF6P49848 677 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 STK38Q15208 465 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 E2F4Q16254 413 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 SLC39A12Q504Y0 691 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 STXBP5Q5T5C0 1151 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 GAREM2Q75VX8 874 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 ZNF687Q8N1G0 1237 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 CXorf38Q8TB03 319 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 CLDN23Q96B33 292 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 CBWD1Q9BRT8 395 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 TRMT61BQ9BVS5 477 aaKnown RBP14.42□□□□□ -0.1
CPSF6-204ENST00000547486 OSBPL6Q9BZF3 934 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 EXOC7Q9UPT5 735 aa14.42□□□□□ -0.1
CPSF6-204ENST00000547486 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms