RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 CEBPBP17676 345 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 RFX1P22670 979 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 CASP1P29466 404 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 TSC2P49815 1807 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 TAF6P49848 677 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 POU5F1Q01860 360 aaKnown RBP28.56■■■□□ 2.16
SRSF9-202ENST00000546942 ATL3Q6DD88 541 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 IQCEQ6IPM2 695 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 ARMCX5Q6P1M9 558 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 ALYREFQ86V81 257 aaKnown RBP28.56■■■□□ 2.16
SRSF9-202ENST00000546942 TMEM209Q96SK2 561 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 BLZF1Q9H2G9 400 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 CEP72Q9P209 647 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 MAFFQ9ULX9 164 aa28.56■■■□□ 2.16
SRSF9-202ENST00000546942 KRBA1A5PL33 1030 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 VNN2O95498 520 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 PAX3P23760 479 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 CLCN5P51795 746 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 DUSP4Q13115 394 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 GPR17Q13304 367 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 CWF19L1Q69YN2 538 aaKnown RBP28.55■■■□□ 2.16
SRSF9-202ENST00000546942 PDZD4Q76G19 769 aaPredicted RBP28.55■■■□□ 2.16
SRSF9-202ENST00000546942 METTL23Q86XA0 190 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 BRSK2Q8IWQ3 736 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 FAM84AQ96KN4 292 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 SLC27A5Q9Y2P5 690 aa28.55■■■□□ 2.16
SRSF9-202ENST00000546942 PI15O43692 258 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 EXTL3O43909 919 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 MYL4P12829 197 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 AFMP43652 599 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 CYP4A22Q5TCH4 519 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 RESP18Q5W5W9 173 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 NT5DC4Q86YG4 428 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 C7orf25Q9BPX7 421 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 CRISPLD1Q9H336 500 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 YIPF1Q9Y548 306 aa28.54■■■□□ 2.16
SRSF9-202ENST00000546942 HOXD11P31277 338 aaPredicted RBP28.53■■■□□ 2.16
SRSF9-202ENST00000546942 GPC5P78333 572 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 MYBPC2Q14324 1141 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 POTEHQ6S545 545 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 GPD1LQ8N335 351 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 CACTINQ8WUQ7 758 aaKnown RBP28.53■■■□□ 2.16
SRSF9-202ENST00000546942 PHOX2BQ99453 314 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 PDE11AQ9HCR9 933 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 AVENQ9NQS1 362 aaPredicted RBP28.53■■■□□ 2.16
SRSF9-202ENST00000546942 GDE1Q9NZC3 331 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 RCOR1Q9UKL0 485 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 DSEQ9UL01 958 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 AGAP1Q9UPQ3 857 aa28.53■■■□□ 2.16
SRSF9-202ENST00000546942 KPNA7A9QM74 516 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 H0Y858 1186 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 ZNF197O14709 1029 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 GALR2O43603 387 aaPredicted RBP28.52■■■□□ 2.16
SRSF9-202ENST00000546942 ITGB3P05106 788 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 POLR2BP30876 1174 aaKnown RBP28.52■■■□□ 2.16
SRSF9-202ENST00000546942 CCR2P41597 374 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 SV2CQ496J9 727 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 PRSS36Q5K4E3 855 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 FAM26FQ5R3K3 315 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 ATAD1Q8NBU5 361 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 OR10T2Q8NGX3 314 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 CHAMP1Q96JM3 812 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 MAGEF1Q9HAY2 307 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 FAM86C1Q9NVL1 165 aa28.52■■■□□ 2.16
SRSF9-202ENST00000546942 MTMR11A4FU01 709 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 CYP11A1P05108 521 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 AOC1P19801 751 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 HOXD13P35453 343 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 ALDH1A3P47895 512 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 SLC39A12Q504Y0 691 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 WSCD1Q658N2 575 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 CENPPQ6IPU0 288 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 GRAMD1CQ8IYS0 662 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 THEM5Q8N1Q8 247 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 CSGALNACT2Q8N6G5 542 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 ATOH1Q92858 354 aaPredicted RBP28.51■■■□□ 2.15
SRSF9-202ENST00000546942 ASAH2Q9NR71 780 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 ARHGEF3Q9NR81 526 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 SLC2A4RGQ9NR83 387 aa28.51■■■□□ 2.15
SRSF9-202ENST00000546942 NRG2O14511 850 aaPredicted RBP28.5■■■□□ 2.15
SRSF9-202ENST00000546942 SOAT2O75908 522 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 KRT19P08727 400 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 GJA1P17302 382 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 EPHB3P54753 998 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 CUL4BQ13620 913 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 LMBRD2Q68DH5 695 aaPredicted RBP28.5■■■□□ 2.15
SRSF9-202ENST00000546942 SCARA3Q6AZY7 606 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 CNNM4Q6P4Q7 775 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 UNC13DQ70J99 1090 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 NELFCDQ8IXH7 590 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 TTC9BQ8N6N2 239 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 C1orf127Q8N9H9 656 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 BORCS6Q96GS4 357 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 ZNF560Q96MR9 790 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 PLA2G2FQ9BZM2 168 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 TBC1D17Q9HA65 648 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 SERTAD1Q9UHV2 236 aa28.5■■■□□ 2.15
SRSF9-202ENST00000546942 EIF3DO15371 548 aaKnown RBP eCLIP28.49■■■□□ 2.15
SRSF9-202ENST00000546942 PLD1Q13393 1074 aa28.49■■■□□ 2.15
SRSF9-202ENST00000546942 TANGO2Q6ICL3 276 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms