RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ATXN2LQ8WWM7 1075 aaKnown RBP18.08■□□□□ 0.48
CCDC38-203ENST00000546803 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.48
CCDC38-203ENST00000546803 VRTNQ9H8Y1 702 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 PRDM6Q9NQX0 595 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 CLEC1BQ9P126 229 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 TMEM63CQ9P1W3 806 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
CCDC38-203ENST00000546803 SNX9Q9Y5X1 595 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
CCDC38-203ENST00000546803 OR6C75A6NL08 312 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 TRIM49P0CI25 452 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 TRIM49CP0CI26 452 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 EPCAMP16422 314 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 OR1D2P34982 312 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 RBM10P98175 930 aaKnown RBP18.07■□□□□ 0.48
CCDC38-203ENST00000546803 DLX2Q07687 328 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-203ENST00000546803 PPP3CAQ08209 521 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 NCOA4Q13772 614 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 PUS10Q3MIT2 529 aaKnown RBP18.07■□□□□ 0.48
CCDC38-203ENST00000546803 LEXMQ3ZCV2 418 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 CCDC40Q4G0X9 1142 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 ANKRD54Q6NXT1 300 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 LILRA6Q6PI73 481 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 PALB2Q86YC2 1186 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 THEM5Q8N1Q8 247 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 TMEM86AQ8N2M4 240 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 TOP6BLQ8N6T0 577 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 MSLNLQ96KJ4 702 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 XYLT2Q9H1B5 865 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 TMEM8AQ9HCN3 771 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 ANO10Q9NW15 660 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 FBXL5Q9UKA1 691 aa18.07■□□□□ 0.48
CCDC38-203ENST00000546803 BARX2Q9UMQ3 279 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-203ENST00000546803 ADAM12O43184 909 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 TGM5O43548 720 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 FAM163BP0C2L3 166 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 GCLMP48507 274 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 MYL6P60660 151 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 SGSM1Q2NKQ1 1148 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 WSCD1Q658N2 575 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 KRT39Q6A163 491 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
CCDC38-203ENST00000546803 RSPO2Q6UXX9 243 aaPredicted RBP18.06■□□□□ 0.48
CCDC38-203ENST00000546803 GLYCTKQ8IVS8 523 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 TAF4BQ92750 862 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 MED15Q96RN5 788 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 CD207Q9UJ71 328 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 CDH23Q9H251 3354 aa18.06■□□□□ 0.48
CCDC38-203ENST00000546803 H3BQ06 376 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 LETM1O95202 739 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 VNN1O95497 513 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 MARSP56192 900 aaKnown RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 TNNC1P63316 161 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 MRPS5P82675 430 aaKnown RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 ROR1Q01973 937 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 STX1AQ16623 288 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 TPD52L1Q16890 204 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 SKOR2Q2VWA4 1001 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 DCAF17Q5H9S7 520 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-203ENST00000546803 TPGS2Q68CL5 300 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 RTL10Q7L3V2 364 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 LIMS2Q7Z4I7 341 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 KREMEN2Q8NCW0 462 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 ZNF461Q8TAF7 563 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 IMPG2Q9BZV3 1241 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 MAN1C1Q9NR34 630 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 MAFFQ9ULX9 164 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 L1RE1Q9UN81 338 aa18.05■□□□□ 0.48
CCDC38-203ENST00000546803 PDCD11Q14690 1871 aaKnown RBP18.04■□□□□ 0.48
CCDC38-203ENST00000546803 ABLIM3O94929 683 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 HLA-DRAP01903 254 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 P4HA1P13674 534 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 PIK3CAP42336 1068 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 LHX1P48742 406 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 MXI1P50539 228 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 TFF2Q03403 129 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 SOWAHAQ2M3V2 549 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 ZNF667Q5HYK9 610 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 SYCE2Q6PIF2 218 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC38-203ENST00000546803 SLC35C1Q96A29 364 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 SFXN1Q9H9B4 322 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 FBXW11Q9UKB1 542 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 FAM50BQ9Y247 325 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 TRIP11Q15643 1979 aa18.04■□□□□ 0.48
CCDC38-203ENST00000546803 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 GABRDO14764 452 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 TACC1O75410 805 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 ASS1P00966 412 aaKnown RBP18.03■□□□□ 0.48
CCDC38-203ENST00000546803 CPB1P15086 417 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 ARPP19P56211 112 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 MYL7Q01449 175 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 ITIH3Q06033 890 aa18.03■□□□□ 0.48
CCDC38-203ENST00000546803 GPR17Q13304 367 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms