RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 USP20Q9Y2K6 914 aa11.85□□□□□ -0.51
TMEM116-203ENST00000546537 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
TMEM116-203ENST00000546537 CACNA1EQ15878 2313 aa11.85□□□□□ -0.51
TMEM116-203ENST00000546537 PI4KAP42356 2102 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 CITO14578 2027 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 OTOL1A6NHN0 477 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 FGF19O95750 216 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 EPHB3P54753 998 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 RUNX3Q13761 415 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 DMC1Q14565 340 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 MAPK6Q16659 721 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 USP39Q53GS9 565 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 TRIM61Q5EBN2 209 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 XKR4Q5GH76 650 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 GPR158Q5T848 1215 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 ALKAL1Q6UXT8 129 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 RPLP0P6Q8NHW5 317 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 HNRNPLLQ8WVV9 542 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 PIGKQ92643 395 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 DDX12PQ92771 950 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 SUSD3Q96L08 255 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 EIF2AK1Q9BQI3 630 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 CCDC113Q9H0I3 377 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 C2orf40Q9H1Z8 148 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 CRISPLD1Q9H336 500 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 ATXN3LQ9H3M9 355 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 HPS4Q9NQG7 708 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 GKN1Q9NS71 199 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 NUB1Q9Y5A7 615 aa11.84□□□□□ -0.51
TMEM116-203ENST00000546537 ZNF638Q14966 1978 aaKnown RBP11.84□□□□□ -0.51
TMEM116-203ENST00000546537 BPTFQ12830 3046 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 ENGP17813 658 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 BCKDHBP21953 392 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 MAPK8P45983 427 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 DHPSP49366 369 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-203ENST00000546537 GALK1P51570 392 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 FAM193AP78312 1265 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 ZNF423Q2M1K9 1284 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 Q6ZUG5 572 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 NEK8Q86SG6 692 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 BRF1Q92994 677 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 PSMG2Q969U7 264 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 ACDQ96AP0 544 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
TMEM116-203ENST00000546537 TPSD1Q9BZJ3 242 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
TMEM116-203ENST00000546537 TASP1Q9H6P5 420 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 SCUBE2Q9NQ36 999 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
TMEM116-203ENST00000546537 CYSRT1A8MQ03 144 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 MARCH6O60337 910 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 GABRR2P28476 465 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 RPL9P32969 192 aaKnown RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 AMPD2Q01433 879 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 C19orf57Q0VDD7 668 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 DUSP4Q13115 394 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 KRT32Q14532 448 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 DNAJB7Q7Z6W7 309 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 RASSF3Q86WH2 238 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 SLFN12Q8IYM2 578 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 EZH1Q92800 747 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 LRIG1Q96JA1 1093 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 ZMAT2Q96NC0 199 aaKnown RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 P2RY13Q9BPV8 354 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 POLR3CQ9BUI4 534 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 EBF3Q9H4W6 596 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 TOPORSQ9NS56 1045 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-203ENST00000546537 TBX20Q9UMR3 447 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 OBSL1O75147 1896 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 PLXND1Q9Y4D7 1925 aa11.82□□□□□ -0.52
TMEM116-203ENST00000546537 PTPRBP23467 1997 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
TMEM116-203ENST00000546537 OR4Q2P0C623 313 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMEM116-203ENST00000546537 CPA1P15085 419 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 MCM4P33991 863 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 GRM5P41594 1212 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
TMEM116-203ENST00000546537 YARSP54577 528 aaKnown RBP11.81□□□□□ -0.52
TMEM116-203ENST00000546537 CYP4F8P98187 520 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms