RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 WDTC1Q8N5D0 677 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 ARRDC4Q8NCT1 418 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 MSANTD4Q8NCY6 345 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 HPDLQ96IR7 371 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 HEXIM2Q96MH2 286 aaKnown RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 MCEEQ96PE7 176 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 ADAMTS10Q9H324 1103 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 STXBP5LQ9Y2K9 1186 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 MAGEB2O15479 319 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 F2P00734 622 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 RGS2P41220 211 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 MTM1Q13496 603 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 DNAJC21Q5F1R6 531 aaKnown RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 LINC01465Q8N7H1 131 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 PIWIL1Q96J94 861 aaKnown RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 DPP3Q9NY33 737 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 CCDC151A5D8V7 595 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 SGSM1Q2NKQ1 1148 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 ZNF667Q5HYK9 610 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 GDF6Q6KF10 455 aaPredicted RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 UHMK1Q8TAS1 419 aaKnown RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 HASPINQ8TF76 798 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 GTF3C2Q8WUA4 911 aaPredicted RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 TMEM174Q8WUU8 243 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 JPH2Q9BR39 696 aaPredicted RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 SELENOOQ9BVL4 669 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 NIF3L1Q9GZT8 377 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 NEUROG2Q9H2A3 272 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
CCDC38-202ENST00000546386 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
CCDC38-202ENST00000546386 DAPK3O43293 454 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 RECQL4O94761 1208 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 RARBP10826 455 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 KRT10P13645 584 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 EIF4BP23588 611 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TAS2R40P59535 323 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 NOMO3P69849 1222 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 ADCY2Q08462 1091 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 SMC1AQ14683 1233 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TAF5Q15542 800 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 CCNI2Q6ZMN8 369 aaPredicted RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 SLFN11Q7Z7L1 901 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 ACOT1Q86TX2 421 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TXLNBQ8N3L3 684 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 CASKIN2Q8WXE0 1202 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 RABEP2Q9H5N1 569 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 STIM2Q9P246 746 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 I3L4J1 428 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 PGRMC1O00264 195 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 RFX1P22670 979 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 SNX17Q15036 470 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 IFI16Q16666 785 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 OR2W6PQ8NHA6 318 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 NDRG1Q92597 394 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
CCDC38-202ENST00000546386 ADPGKQ9BRR6 497 aa12.73□□□□□ -0.37
CCDC38-202ENST00000546386 MYO1FO00160 1098 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 LMO2P25791 158 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 NDST1P52848 882 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 OGDHQ02218 1023 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 SOX4Q06945 474 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 CDO1Q16878 200 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 APBA2Q99767 749 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 PAAF1Q9BRP4 392 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 GCOM2Q9BZD3 368 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 RAB21Q9UL25 225 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 NRCAMQ92823 1304 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 KIF3CO14782 793 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 ASAP2O43150 1006 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms