RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RASSF2P50749 326 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 KHDC1Q4VXA5 237 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 ANKRD35Q8N283 1001 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 CCDC89Q8N998 374 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 PPP1R14CQ8TAE6 165 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 FAM111AQ96PZ2 611 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 DENND2DQ9H6A0 471 aaPredicted RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 RXFP1Q9HBX9 757 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 KMT5AQ9NQR1 393 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 KCNH7Q9NS40 1196 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 NYAP2Q9P242 653 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 F8VP50 259 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 H3BRJ5 948 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 SERPINB3P29508 390 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 PEX5P50542 639 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 THOC5Q13769 683 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 BMPR2Q13873 1038 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 IL31Q6EBC2 164 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 SV2AQ7L0J3 742 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 NLRP9Q7RTR0 991 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 DAW1Q8N136 415 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 UTP4Q969X6 686 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 LAMA3Q16787 3333 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 CFAP73A6NFT4 308 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 MAPK13O15264 365 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 WEE2P0C1S8 567 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 GAP43P17677 238 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 ATP5DP30049 168 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 ALDH18A1P54886 795 aaKnown RBP15.48■□□□□ 0.07
HOXC11-202ENST00000546378 PEX6Q13608 980 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SCYL2Q6P3W7 929 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 CCNJLQ8IV13 435 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 PYROXD1Q8WU10 500 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 CKAP2Q8WWK9 683 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SEC14L1Q92503 715 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 KIFAP3Q92845 792 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 ART4Q93070 314 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 WNT8AQ9H1J5 351 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 PPARGC1AQ9UBK2 798 aaKnown RBP15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SEPT9Q9UHD8 586 aaPredicted RBP15.48■□□□□ 0.07
HOXC11-202ENST00000546378 CDH16O75309 829 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 TOP3BO95985 862 aaKnown RBP15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SPARCL1Q14515 664 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 POU5F2Q8N7G0 328 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 TEKT4Q8WW24 435 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 FAM20AQ96MK3 541 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 GRID1Q9ULK0 1009 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 MAD1L1Q9Y6D9 718 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 WASF2Q9Y6W5 498 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 CCDC78A2IDD5 438 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SERPINB4P48594 390 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 BNIP1Q12981 228 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 COBLL1Q53SF7 1204 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 WDR44Q5JSH3 913 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 FYB2Q5VWT5 728 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 C3orf62Q6ZUJ4 267 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 HSD17B14Q9BPX1 270 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 GGA3Q9NZ52 723 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 NR2E3Q9Y5X4 410 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 AK5Q9Y6K8 562 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
HOXC11-202ENST00000546378 LOC100653049A0A140TA62 436 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 SLC16A3O15427 465 aaKnown RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 OPHN1O60890 802 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 ATP9AO75110 1047 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 KRT34O76011 436 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 NUMBP49757 651 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 MARSP56192 900 aaKnown RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 BRDTQ58F21 947 aaPredicted RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 DNAJC9Q8WXX5 260 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 RAB20Q9NX57 234 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 ZFATQ9P243 1243 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 UMODL1Q5DID0 1318 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 GHRP10912 638 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 ESRRAP11474 423 aaPredicted RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 BGNP21810 368 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 YWHABP31946 246 aaKnown RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 TSNAXIP1Q2TAA8 658 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 ACAP3Q96P50 834 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 RAB3IPQ96QF0 476 aaPredicted RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 MAK16Q9BXY0 300 aaKnown RBP15.47■□□□□ 0.07
HOXC11-202ENST00000546378 TXLNGQ9NUQ3 528 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 IRAK4Q9NWZ3 460 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 MYH11P35749 1972 aa15.47■□□□□ 0.07
HOXC11-202ENST00000546378 CCDC189A1A4V9 331 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 UNC5CO95185 931 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 ITGB5P18084 799 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 ATP4AP20648 1035 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SREBF1P36956 1147 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 GMPRP36959 345 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SPP2Q13103 211 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 TNFAIP1Q13829 316 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 PPP6R3Q5H9R7 873 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms