RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USP15Q9Y4E8 981 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 IVNS1ABPQ9Y6Y0 642 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ADORA2BP29275 332 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 JAK3P52333 1124 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 RBBP5Q15291 538 aaKnown RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 DCAF12L1Q5VU92 463 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ANKRD20A3Q5VUR7 823 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ISLR2Q6UXK2 745 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 FBXO16Q8IX29 292 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ARL10Q8N8L6 244 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 GMCL1P1Q8NEA9 526 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 DTX3LQ8TDB6 740 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 AGAP11Q8TF27 550 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 CPB2Q96IY4 423 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 AGAP3Q96P47 875 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 PXMP2Q9NR77 195 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 KLK14Q9P0G3 267 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 A0A0A6YYK5 440 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 CFAP69A5D8W1 941 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 EIF3DO15371 548 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 PDHA1P08559 390 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ATXN3P54252 364 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-203ENST00000546084 MCPH1Q8NEM0 835 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 RMI1Q9H9A7 625 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 NPHS2Q9NP85 383 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 POLIQ9UNA4 740 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 UBE4BO95155 1302 aa10.34□□□□□ -0.75
TRAF1-203ENST00000546084 VTNP04004 478 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 GHRP10912 638 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ATP5DP30049 168 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SSTR1P30872 391 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ARL1P40616 181 aaPredicted RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 MMP13P45452 471 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 CDH6P55285 790 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 CDR2Q01850 454 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 PGM2Q96G03 612 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 WNT8AQ9H1J5 351 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TMEM8AQ9HCN3 771 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 MRPL47Q9HD33 250 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SPATS2LQ9NUQ6 558 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 DIS3Q9Y2L1 958 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 NEU2Q9Y3R4 380 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 UBR2Q8IWV8 1755 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 C5orf60A6NFR6 353 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ZNF862O60290 1169 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 APRTP07741 180 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 NQO1P15559 274 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TCF4P15884 667 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TCF7P36402 384 aaPredicted RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ALDH5A1P51649 535 aaPredicted RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 FMO1Q01740 532 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ZNF667Q5HYK9 610 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TATDN1Q6P1N9 297 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TLCD1Q96CP7 247 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TMEM237Q96Q45 408 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 TEX13BQ9BXU2 312 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 CACNA1SQ13698 1873 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 CFAP73A6NFT4 308 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 A8MUI8 341 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 WDR46O15213 610 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ASAP2O43150 1006 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 RIPK2O43353 540 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 INHBAP08476 426 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 MSH2P43246 934 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 PSMD6Q15008 389 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 LACTB2Q53H82 288 aaPredicted RBP10.33□□□□□ -0.76
TRAF1-203ENST00000546084 MFSD7Q6UXD7 560 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SPATA21Q7Z572 469 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SLFN11Q7Z7L1 901 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 RHOT1Q8IXI2 618 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 GRK7Q8WTQ7 553 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SNF8Q96H20 258 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 SLCO1B3Q9NPD5 702 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 PNMA3Q9UL41 463 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 DNPEPQ9ULA0 475 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 AGAP1Q9UPQ3 857 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
TRAF1-203ENST00000546084 ARHGAP42A6NI28 874 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 VWA5AO00534 786 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 MGRN1O60291 552 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 DGAT1O75907 488 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 PAEPP09466 180 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 KRT3P12035 628 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 DESP17661 470 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
TRAF1-203ENST00000546084 TAS2R40P59535 323 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 IL9RQ01113 521 aa10.32□□□□□ -0.76
TRAF1-203ENST00000546084 RNASELQ05823 741 aaKnown RBP10.32□□□□□ -0.76
TRAF1-203ENST00000546084 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
TRAF1-203ENST00000546084 ITIH4Q14624 930 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms