RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ACAD10Q6JQN1 1059 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SPATA21Q7Z572 469 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 MCF2L2Q86YR7 1114 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 TPH2Q8IWU9 490 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RPUSD2Q8IZ73 545 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 INPP5DQ92835 1189 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 GLG1Q92896 1179 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ARHGEF2Q92974 986 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 MIEF2Q96C03 454 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 DYDC2Q96IM9 177 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RANBP17Q9H2T7 1088 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 UBE2TQ9NPD8 197 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ARHGEF3Q9NR81 526 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ANKEF1Q9NU02 776 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 TBC1D22BQ9NU19 505 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 PRKAG3Q9UGI9 489 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 NOCTQ9UK39 431 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 AJAP1Q9UKB5 411 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 COG5Q9UP83 839 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 C15orf41Q9Y2V0 281 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ZHX2Q9Y6X8 837 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NFASCO94856 1347 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 IGSF9BQ9UPX0 1349 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TMEM120BA0PK00 339 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 DCDC2CA8MYV0 355 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 K7ENM7 598 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TRAFD1O14545 582 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 PRPF4O43172 522 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ZBED4O75132 1171 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 HIP1RO75146 1068 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 SHBGP04278 402 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 VSIG8P0DPA2 414 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 RARAP10276 462 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ATF2P15336 505 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 SFNP31947 248 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 GBP2P32456 591 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NOS2P35228 1153 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 PTPN7P35236 360 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 JAK3P52333 1124 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NCKAP1LP55160 1127 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NCALDP61601 193 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 CYP4A11Q02928 519 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 MCL1Q07820 350 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 IKQ13123 557 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 CLEC16AQ2KHT3 1053 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 LIN9Q5TKA1 542 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 LRRC38Q5VT99 294 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 FKBP1CQ5VVH2 108 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 GJB7Q6PEY0 223 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 Q6ZVU0 165 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ASRGL1Q7L266 308 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 EXOC3L1Q86VI1 746 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 CEP57Q86XR8 500 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ETFBKMTQ8IXQ9 262 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 C4orf19Q8IY42 314 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 KATNAL2Q8IYT4 538 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 FBXO41Q8TF61 875 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TCP11Q8WWU5 503 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 N4BP2L2Q92802 583 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ZNF653Q96CK0 615 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 KLHL29Q96CT2 875 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 C18orf8Q96DM3 657 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 SCLT1Q96NL6 688 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 PRMT1Q99873 361 aaKnown RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ELAC2Q9BQ52 826 aaKnown RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 MXRA8Q9BRK3 442 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 LXNQ9BS40 222 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ZNF577Q9BSK1 485 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NUP85Q9BW27 656 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TRIM31Q9BZY9 425 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 CDC42EP4Q9H3Q1 356 aaKnown RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 GOLPH3Q9H4A6 298 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 DNAJC18Q9H819 358 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 MRPL47Q9HD33 250 aaKnown RBP6.87□□□□□ -1.31
SNHG1-225ENST00000545920 ERVK-5Q9HDB9 667 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 RGL1Q9NZL6 768 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TCEAL9Q9UHQ7 104 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 SLC24A2Q9UI40 661 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 FEM1BQ9UK73 627 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 NR2E1Q9Y466 385 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 SCINQ9Y6U3 715 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 TAF1P21675 1872 aa6.87□□□□□ -1.31
SNHG1-225ENST00000545920 BTAF1O14981 1849 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 FAM47DPA6NHR8 397 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms