RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 MTIF3Q9H2K0 278 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 CLASP2O75122 1294 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 PDHBP11177 359 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 CHN1P15882 459 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 SPATA16Q9BXB7 569 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 TMEM117Q9H0C3 514 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 GOLPH3Q9H4A6 298 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 MTO1Q9Y2Z2 717 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 P4HA2O15460 535 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 EMC2Q15006 297 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 SMAD1Q15797 465 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 IL31Q6EBC2 164 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 NOTUMQ6P988 496 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 NUP93Q8N1F7 819 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 FRMD8Q9BZ67 464 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 MRPL28Q13084 256 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 PTK7Q13308 1070 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 PTK6Q13882 451 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 LMBRD2Q68DH5 695 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 EME1Q96AY2 570 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 ZNF512Q96ME7 567 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 GID8Q9NWU2 228 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 ZNF229Q9UJW7 825 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 NPEPPSP55786 919 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 USP10Q14694 798 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 RFX8Q6ZV50 586 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 EFL1Q7Z2Z2 1120 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 ADSSL1Q8N142 457 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 RBBP8NLQ8NC74 664 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 PARK7Q99497 189 aaKnown RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 LRRIQ3A6PVS8 624 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 MTF1Q14872 753 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
CIT-217ENST00000545913 SLC30A1Q9Y6M5 507 aa12.24□□□□□ -0.45
CIT-217ENST00000545913 AKAP10O43572 662 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 SYN2Q92777 582 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 DAB2IPQ5VWQ8 1189 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CAPRIN2Q6IMN6 1127 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 VPS33BQ9H267 617 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CFAP99D6REC4 459 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 ASMTLO95671 621 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 APOA4P06727 396 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PLA2G4AP47712 749 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 HARS2P49590 506 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 DCAF6Q58WW2 860 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PLD3Q8IV08 490 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.454e-6■■□□□ 13.1
CIT-217ENST00000545913 NDUFB10O96000 172 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 MTFR1Q15390 333 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 DGKDQ16760 1214 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 UGT3A1Q6NUS8 523 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CCT8L2Q96SF2 557 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 DEAF1O75398 565 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 ENO3P13929 434 aaPredicted RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 PPP3CCP48454 512 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CPT1AP50416 773 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PRKCEQ02156 737 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 TADA1Q96BN2 335 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 MOV10L1Q9BXT6 1211 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 C17orf75Q9HAS0 396 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CD274Q9NZQ7 290 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CENPCQ03188 943 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 EFHC1Q5JVL4 640 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 OSBPL8Q9BZF1 889 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 FOXN1O15353 648 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 KDM1AO60341 852 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.456e-8■■■■■ 29.6
CIT-217ENST00000545913 VSNL1P62760 191 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PTRHD1Q6GMV3 140 aaKnown RBP12.23□□□□□ -0.45
CIT-217ENST00000545913 TEX9Q8N6V9 391 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 VPS37AQ8NEZ2 397 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 HPS3Q969F9 1004 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 PDLIM2Q96JY6 352 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 GRID1Q9ULK0 1009 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
CIT-217ENST00000545913 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
CIT-217ENST00000545913 SERPIND1P05546 499 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms