RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LMBRD2Q68DH5 695 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 IL31Q6EBC2 164 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 TBC1D19Q8N5T2 526 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ABTB1Q969K4 478 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 STN1Q9H668 368 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 GPRC5CQ9NQ84 441 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 CNOT8Q9UFF9 292 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 HPSEQ9Y251 543 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ALDH2P05091 517 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 KLRC2P26717 231 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 AKT1P31749 480 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 PRKCQQ04759 706 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 NSUN2Q08J23 767 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 EMC2Q15006 297 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 GJC2Q5T442 439 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ALKBH5Q6P6C2 394 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 TRIM67Q6ZTA4 783 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 WHAMMQ8TF30 809 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 TNFRSF25Q93038 417 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 RUNDC3BQ96NL0 473 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 GAS2L1Q99501 681 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 EGFL8Q99944 293 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 VCXQ9H320 206 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 PAPOLBQ9NRJ5 636 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 L1RE1Q9UN81 338 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 SYNCRIPO60506 623 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 AMHP03971 560 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 PDHA1P08559 390 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 GNA15P30679 374 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ACOT2P49753 483 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ATP11AP98196 1134 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 STARD3Q14849 445 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 IL17AQ16552 155 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 KCNK18Q7Z418 384 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 CHSY1Q86X52 802 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 HAS1Q92839 578 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 SHISA4Q96DD7 197 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 PORCNQ9H237 461 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 SLC28A3Q9HAS3 691 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 TUFT1Q9NNX1 390 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 RWDD2AQ9UIY3 292 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ANAPC7Q9UJX3 599 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 MYO9BQ13459 2157 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SNX2O60749 519 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 LGR5O75473 907 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ITGB5P18084 799 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SERPINB6P35237 376 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 IFNAR2P48551 515 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ALDH5A1P51649 535 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TAF11Q15544 211 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 MAPRE1Q15691 268 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KNOP1Q1ED39 458 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SV2CQ496J9 727 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ZC2HC1CQ53FD0 456 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 C10orf120Q5SQS8 335 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ATF7IP2Q5U623 682 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TBC1D1Q86TI0 1168 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 OOSP2Q86WS3 158 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TRIM48Q8IWZ4 208 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CACNA2D3Q8IZS8 1091 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 FOPNLQ96NB1 174 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 OSBPL9Q96SU4 736 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 MTG1Q9BT17 334 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KLC2Q9H0B6 622 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 BATF3Q9NR55 127 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 COL20A1Q9P218 1284 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 PVALEFA0A1B0GWK0 134 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SYNDIG1LA6NDD5 238 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 DIAPH2O60879 1101 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ATP9AO75110 1047 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TMCC1O94876 653 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 PRAMEF19Q5SWL8 479 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TMEM199Q8N511 208 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 FBXL13Q8NEE6 735 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CCHCR1Q8TD31 782 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 COPS5Q92905 334 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 GPRASP2Q96D09 838 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KIFC3Q9BVG8 833 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 AGO4Q9HCK5 861 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 MYPNQ86TC9 1320 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 UBA6A0AVT1 1052 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 A6NNZ2 444 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 H3BRJ5 948 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 NPTXRO95502 500 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CASP14P31944 242 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms