RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SMRP1Q8NCR6 262 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 LEO1Q8WVC0 666 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 RABGGTAQ92696 567 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 STAMQ92783 540 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 ACCSQ96QU6 501 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TSPAN18Q96SJ8 248 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 PAAF1Q9BRP4 392 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TTPALQ9BTX7 342 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 MSTO1Q9BUK6 570 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CXCL16Q9H2A7 254 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TMEM206Q9H813 350 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 RPF1Q9H9Y2 349 aaKnown RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CHST7Q9NS84 486 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 DZANK1Q9NVP4 752 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CNTN3Q9P232 1028 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 SEPT3Q9UH03 358 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 KCNH3Q9ULD8 1083 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 ZDHHC9Q9Y397 364 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 MTCL1Q9Y4B5 1905 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 PRUNE2Q8WUY3 3088 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 A0A0B4J269 797 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 FRMD3A2A2Y4 597 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 F8W810 466 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 KIF4AO95239 1232 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 LDHAP00338 332 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 C1RP00736 705 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CNPP09543 421 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CXCL8P10145 99 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CMA1P23946 247 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 RPL9P32969 192 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 GPC1P35052 558 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CLCN4P51793 760 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CLCNKBP51801 687 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 ASIC1P78348 528 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 RBM10P98175 930 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 POU5F1Q01860 360 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 ITIH3Q06033 890 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 UPP1Q16831 310 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 SLC10A6Q3KNW5 377 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 L1TD1Q5T7N2 865 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CNNM4Q6P4Q7 775 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 ADHFE1Q8IWW8 467 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 GJD3Q8N144 294 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 VN1R2Q8NFZ6 395 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 HASPINQ8TF76 798 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 SLC22A17Q8WUG5 538 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 RIN2Q8WYP3 895 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 POMGNT1Q8WZA1 660 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 C7orf25Q9BPX7 421 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 STRA6Q9BX79 667 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 TRIM9Q9C026 710 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 HAPLN2Q9GZV7 340 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 RXFP1Q9HBX9 757 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 FNIP2Q9P278 1114 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 CACNG4Q9UBN1 327 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 USP25Q9UHP3 1055 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 AGO2Q9UKV8 859 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 UBQLN1Q9UMX0 589 aaKnown RBP8.01□□□□□ -1.13
CPSF7-224ENST00000544990 NUB1Q9Y5A7 615 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 STYXL1Q9Y6J8 313 aa8.01□□□□□ -1.13
CPSF7-224ENST00000544990 A0A1B0GVL5 298 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 PVALEFA0A1B0GWK0 134 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 TTC26A0AVF1 554 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 FAM187AA6NFU0 413 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 LACTBL1A8MY62 500 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ANKRD63C9JTQ0 380 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 PODXLO00592 558 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 KIAA0391O15091 583 aaKnown RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 TEX28O15482 410 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ICMTO60725 284 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 GLUD1P00367 558 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 SLFN14P0C7P3 912 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 BMP2P12643 396 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 EPCAMP16422 314 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 CYP3A5P20815 502 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 GARTP22102 1010 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 TNFSF9P41273 254 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 MTHFRP42898 656 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 AFMP43652 599 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 SOX4Q06945 474 aaPredicted RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 ZNF211Q13398 564 aaPredicted RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 TEAD4Q15561 434 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 PSMD5Q16401 504 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ATAT1Q5SQI0 421 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 C16orf46Q6P387 395 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 SLC39A4Q6P5W5 647 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 SYCE2Q6PIF2 218 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 UNC13DQ70J99 1090 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 HDAC7Q8WUI4 952 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 CCDC34Q96HJ3 373 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms