RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 CAPN15O75808 1086 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 CALCAP01258 141 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ITGB3P05106 788 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SERPING1P05155 500 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 CAPN2P17655 700 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 RFX1P22670 979 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PRKCIP41743 596 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PIK3CAP42336 1068 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 RAB27AP51159 221 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ZNF132P52740 706 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 AMPD2Q01433 879 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 BIRC3Q13489 604 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 MAP9Q49MG5 647 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SFMBT2Q5VUG0 894 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 APBB1IPQ7Z5R6 666 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ZSWIM1Q9BR11 485 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PARD6BQ9BYG5 372 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TRIM6Q9C030 488 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ACBD3Q9H3P7 528 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 UBE2TQ9NPD8 197 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 DPP3Q9NY33 737 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 NOCTQ9UK39 431 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 POLIQ9UNA4 740 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PTPRSQ13332 1948 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ATP8B3O60423 1300 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TARSL2A2RTX5 802 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TMEM191BP0C7N4 346 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ITGA4P13612 1032 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TCP1P17987 556 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 LRPAP1P30533 357 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SOX5P35711 763 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SCNN1GP51170 649 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 KIF11P52732 1056 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 DSC1Q08554 894 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 CUL2Q13617 745 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 RAPGEF1Q13905 1077 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 C9orf57Q5W0N0 161 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 CC2D1AQ6P1N0 951 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 WDR93Q6P2C0 686 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SLC24A5Q71RS6 500 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 C16orf59Q7L2K0 433 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ZNF571Q7Z3V5 609 aaPredicted RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PALB2Q86YC2 1186 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 NT5C1BQ96P26 610 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PAAF1Q9BRP4 392 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 NIF3L1Q9GZT8 377 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 SMYD3Q9H7B4 428 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 ITGA11Q9UKX5 1188 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 GIT1Q9Y2X7 761 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 PCDHA13Q9Y5I0 950 aa7.5□□□□□ -1.21
HMGCS2-204ENST00000544913 LAMA3Q16787 3333 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TSC2P49815 1807 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 SPDYE4A6NLX3 237 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 F8W810 466 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 EVI5O60447 810 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 GFPT2O94808 682 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TIMP1P01033 207 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TNNC2P02585 160 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 FGFR1P11362 822 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 CHRNB2P17787 502 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 CYP3A5P20815 502 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 MAGEA1P43355 309 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 GATMP50440 423 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 YARSP54577 528 aaKnown RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 PTK2Q05397 1052 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 ARHGAP44Q17R89 818 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 HDXQ7Z353 690 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 SLC30A5Q8TAD4 765 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 EPS8L1Q8TE68 723 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 SLC20A1Q8WUM9 679 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 ANKRD36BP1Q96IX9 119 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TWNKQ96RR1 684 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TSPAN18Q96SJ8 248 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 RSAD1Q9HA92 442 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 RC3H2Q9HBD1 1191 aaKnown RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 HCSTQ9UBK5 93 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 HMGXB4Q9UGU5 601 aa7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 FNDC1Q4ZHG4 1894 aaPredicted RBP7.49□□□□□ -1.21
HMGCS2-204ENST00000544913 RCCD1A6NED2 376 aa7.48□□□□□ -1.21
HMGCS2-204ENST00000544913 BTNL10A8MVZ5 291 aa7.48□□□□□ -1.21
HMGCS2-204ENST00000544913 DDX3XO00571 662 aaKnown RBP eCLIP7.48□□□□□ -1.21
HMGCS2-204ENST00000544913 ABL1P00519 1130 aa7.48□□□□□ -1.21
HMGCS2-204ENST00000544913 CSF2RAP15509 400 aa7.48□□□□□ -1.21
HMGCS2-204ENST00000544913 ZSCAN20P17040 1043 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms