RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 DNM1LO00429 736 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 DNALI1O14645 258 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 VNN1O95497 513 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ASS1P00966 412 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ITGAVP06756 1048 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 KRT7P08729 469 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 KLRC2P26717 231 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CDH5P33151 784 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 PHBP35232 272 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 MAGEA4P43358 317 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ACOT2P49753 483 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TRPC3Q13507 836 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ACAP1Q15027 740 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 KYNUQ16719 465 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 HADHQ16836 314 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 DNAJC24Q6P3W2 148 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CENPUQ71F23 418 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CCDC63Q8NA47 563 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 RBM15Q96T37 977 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 KLHL14Q9P2G3 628 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 SLC24A2Q9UI40 661 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 SHOC2Q9UQ13 582 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ZNF148Q9UQR1 794 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TP73O15350 636 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 LIASO43766 372 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 SKIV2L2P42285 1042 aaKnown RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 ZC3H12AQ5D1E8 599 aaKnown RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 FNIP1Q8TF40 1166 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 NKD2Q969F2 451 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 WRNIP1Q96S55 665 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 MIS12Q9H081 205 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
CPSF7-223ENST00000544669 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 CNTNAP2Q9UHC6 1331 aa13.79□□□□□ -0.2
CPSF7-223ENST00000544669 FAM47DPA6NHR8 397 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 OGTO15294 1046 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 MGRN1O60291 552 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TFDP1Q14186 410 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 MICALL2Q8IY33 904 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TTC39CQ8N584 583 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 DDX23Q9BUQ8 820 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 LHX5Q9H2C1 402 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 NAALADL1Q9UQQ1 740 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 OAS1P00973 400 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TNNC2P02585 160 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 KRT1P04264 644 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 CHKAP35790 457 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 SLC26A2P50443 739 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 STAT5BP51692 787 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 HMGCS2P54868 508 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 KYAT1Q16773 422 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 P3H1Q32P28 736 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 RNF43Q68DV7 783 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 SPATA21Q7Z572 469 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ERICH1Q86X53 443 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 THNSL1Q8IYQ7 743 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 UBR7Q8N806 425 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 UHMK1Q8TAS1 419 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ATG4AQ8WYN0 398 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 SLITRK1Q96PX8 696 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
CPSF7-223ENST00000544669 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
CPSF7-223ENST00000544669 COL4A5P29400 1685 aa13.77□□□□□ -0.2
CPSF7-223ENST00000544669 EXOC1LA0A1B0GW35 172 aa13.77□□□□□ -0.21
CPSF7-223ENST00000544669 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
CPSF7-223ENST00000544669 ALOX15BO15296 676 aa13.77□□□□□ -0.21
CPSF7-223ENST00000544669 MAGEB2O15479 319 aa13.77□□□□□ -0.21
CPSF7-223ENST00000544669 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■■■■ 34.9
CPSF7-223ENST00000544669 IL18RAPO95256 599 aa13.77□□□□□ -0.21
CPSF7-223ENST00000544669 GJB6O95452 261 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms