RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 XRRA1Q6P2D8 792 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 SYDE1Q6ZW31 735 aaPredicted RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 SLC26A7Q8TE54 656 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 CDH16O75309 829 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 PON1P27169 355 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 ITGA8P53708 1063 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 ERVK-24P63145 666 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 TRIM65Q6PJ69 517 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 C3orf62Q6ZUJ4 267 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 FBXO16Q8IX29 292 aaPredicted RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 TLR2O60603 784 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 ETFBP38117 255 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 USP10Q14694 798 aaKnown RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 FAM71DQ8N9W8 422 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 USP38Q8NB14 1042 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 PTPRN2Q92932 1015 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 BHMTQ93088 406 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 C2CD2LO14523 706 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 AGTP01019 485 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 CYBBP04839 570 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 BACE1P56817 501 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
CHD4-211ENST00000544484 ASMTLO95671 621 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 IPMKQ8NFU5 416 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 SLC38A7Q9NVC3 462 aa13.42□□□□□ -0.26
CHD4-211ENST00000544484 CSDE1O75534 798 aaKnown RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 PCSK1P29120 753 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 ATICP31939 592 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 CUL2Q13617 745 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 FAXCQ5TGI0 409 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 LMNAP02545 664 aaKnown RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 ENO1P06733 434 aaKnown RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 SOX10P56693 466 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 GIT2Q14161 759 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 KIZQ2M2Z5 673 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 CCDC33Q8N5R6 958 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 ELMO2Q96JJ3 720 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 ING2Q9H160 280 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHD4-211ENST00000544484 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 SREBF1P36956 1147 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 NPTX2P47972 431 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 NRXN1Q9ULB1 1477 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 P4HA2O15460 535 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 VTNP04004 478 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 YY1P25490 414 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 MAGEA4P43358 317 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 VCPP55072 806 aaKnown RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
CHD4-211ENST00000544484 DPP3Q9NY33 737 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 SENP1Q9P0U3 644 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 STOML1Q9UBI4 398 aa13.41□□□□□ -0.26
CHD4-211ENST00000544484 VCAM1P19320 739 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 CXCL9Q07325 125 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 TWF1Q12792 350 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 LRRC8EQ6NSJ5 796 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 ST13P4Q8IZP2 240 aaPredicted RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 DCUN1D1Q96GG9 259 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PACSIN1Q9BY11 444 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 RSAD1Q9HA92 442 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 C20orf96Q9NUD7 363 aaPredicted RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 ARHGEF38Q9NXL2 777 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 TMCC1O94876 653 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PTK7Q13308 1070 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 DNAAF5Q86Y56 855 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 KCNB2Q92953 911 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 ZIM3Q96PE6 472 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 ERP44Q9BS26 406 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 WARS2Q9UGM6 360 aaKnown RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 LSM7Q9UK45 103 aaKnown RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 CCDC22O60826 627 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 EEF1DP29692 281 aaKnown RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 THPOP40225 353 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 TAF6P49848 677 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 TPCN2Q8NHX9 752 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PSMC3IPQ9P2W1 217 aaPredicted RBP13.4□□□□□ -0.26
CHD4-211ENST00000544484 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PFDN1O60925 122 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.262e-6■■■□□ 18.8
CHD4-211ENST00000544484 NTRK3Q16288 839 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PKN1Q16512 942 aa13.4□□□□□ -0.26
CHD4-211ENST00000544484 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms