RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	ZNF202	O95125	648 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	RPN1	P04843	607 aa	Known RBP	13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	ITGB3	P05106	788 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	CYP11A1	P05108	521 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	KRT19	P08727	400 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	POLR2B	P30876	1174 aa	Known RBP	13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	HOXD13	P35453	343 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	ADCY1	Q08828	1119 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	SIGLEC14	Q08ET2	396 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	MYO1E	Q12965	1108 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	PLD1	Q13393	1074 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	SNRNP35	Q16560	246 aa	Known RBP	13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	KRBA2	Q6ZNG9	492 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	TRIM67	Q6ZTA4	783 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	CBWD2	Q8IUF1	395 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	C12orf56	Q8IXR9	622 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	TMEM130	Q8N3G9	435 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	CSGALNACT2	Q8N6G5	542 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	ZSWIM2	Q8NEG5	633 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	NXPE3	Q969Y0	559 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	MTMR12	Q9C0I1	747 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	PDE11A	Q9HCR9	933 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	IGSF9	Q9P2J2	1179 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	EPS15L1	Q9UBC2	864 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	AGAP1	Q9UPQ3	857 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	HCN4	Q9Y3Q4	1203 aa		13.63	□□□□□ -0.23
CLPB-213	ENST00000544382	TSC2	P49815	1807 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	TMEM221	A6NGB7	291 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382		M0R296	226 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	CLIC2	O15247	247 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	SPTLC1	O15269	473 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	EXOC3	O60645	756 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	HUS1	O60921	280 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	PLA2G5	P39877	138 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	BFSP1	Q12934	665 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	PABPC1L	Q4VXU2	614 aa	Known RBP	13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	IQCE	Q6IPM2	695 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	WDR49	Q8IV35	697 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	C1orf127	Q8N9H9	656 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	RDH13	Q8NBN7	331 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	FEZF2	Q8TBJ5	459 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	MFSD14A	Q96MC6	490 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	GOLPH3L	Q9H4A5	285 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	C11orf16	Q9NQ32	467 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	INTS13	Q9NVM9	706 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	HOOK1	Q9UJC3	728 aa	Known RBP	13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	INSL5	Q9Y5Q6	135 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	TECTA	O75443	2155 aa		13.62	□□□□□ -0.23
CLPB-213	ENST00000544382	ZNF197	O14709	1029 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	CALU	O43852	315 aa	Predicted RBP	13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	ASGR2	P07307	311 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	DLAT	P10515	647 aa	Known RBP	13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	PTPN2	P17706	415 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	TNNI1	P19237	187 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	WNT7B	P56706	349 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	CYP24A1	Q07973	514 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	SMARCB1	Q12824	385 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	STK4	Q13043	487 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	GPR17	Q13304	367 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	TDG	Q13569	410 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	PSMD6	Q15008	389 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	RNF19B	Q6ZMZ0	732 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	TMEM86A	Q8N2M4	240 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	LEMD2	Q8NC56	503 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	KIAA0895	Q8NCT3	520 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	ZNF512	Q96ME7	567 aa	Predicted RBP	13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	MYADM	Q96S97	322 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	CDH7	Q9ULB5	785 aa		13.61	□□□□□ -0.23
CLPB-213	ENST00000544382	TRIO	O75962	3097 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	RHOBTB3	O94955	611 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	SEC24A	O95486	1093 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	RHO	P08100	348 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	LAMP2	P13473	410 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	ALDH1A3	P47895	512 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	EPHB3	P54753	998 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	MYL7	Q01449	175 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	TSPY1	Q01534	308 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	TWF1	Q12792	350 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	DPYD	Q12882	1025 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	KCNB1	Q14721	858 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	CYP4A22	Q5TCH4	519 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	WSCD1	Q658N2	575 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	MTSS1L	Q765P7	747 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	PDZD4	Q76G19	769 aa	Predicted RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	SUGP1	Q8IWZ8	645 aa	Known RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	DCP1B	Q8IZD4	617 aa	Known RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	SPATA18	Q8TC71	538 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	C2orf15	Q8WU43	125 aa	Known RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	CCDC127	Q96BQ5	260 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	PGLYRP2	Q96PD5	576 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	CGRRF1	Q99675	332 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	CORO1B	Q9BR76	489 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	KCNK12	Q9HB15	430 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	AVEN	Q9NQS1	362 aa	Predicted RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	RMND1	Q9NWS8	449 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	DNMT3B	Q9UBC3	853 aa	Known RBP	13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	HSFX1	Q9UBD0	423 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	FRMD4B	Q9Y2L6	1034 aa		13.6	□□□□□ -0.23
CLPB-213	ENST00000544382	MRPS23	Q9Y3D9	190 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms