RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 O00370 1275 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 ARIH2O95376 493 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CHN1P15882 459 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CETN2P41208 172 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 ITGA8P53708 1063 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 MYL6P60660 151 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 IRX3P78415 501 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-208ENST00000544327 IFI35P80217 286 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CCDC89Q8N998 374 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 TMEM35BQ8NCS4 154 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 PTPRHQ9HD43 1115 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CXCL11O14625 94 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 B4GALT4O60513 344 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 FSBPO95073 299 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 TTC4O95801 387 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 HOXC6P09630 235 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 EIF4BP23588 611 aaKnown RBP18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CHKAP35790 457 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 SLC26A2P50443 739 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 COPS2P61201 443 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 LMNB2Q03252 620 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 PLCB4Q15147 1175 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 LLGL1Q15334 1064 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 PPP1R15BQ5SWA1 713 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 DAB2IPQ5VWQ8 1189 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 SCARA3Q6AZY7 606 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 TAOK1Q7L7X3 1001 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 ZBTB33Q86T24 672 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 NIPA2Q8N8Q9 360 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 MDM1Q8TC05 714 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CHMP6Q96FZ7 201 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 SCLT1Q96NL6 688 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 ANAPC5Q9UJX4 755 aa18.79■□□□□ 0.6
SCARB1-208ENST00000544327 DNAJC25-GNG10A0A024R161 153 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 LOC102724159A0A0B4J2E5 919 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 ACKR2O00590 384 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 KLRC2P26717 231 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 YWHAEP62258 255 aaKnown RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 NFX1Q12986 1120 aaKnown RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 PWP2Q15269 919 aaKnown RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 QPCTQ16769 361 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 TTC31Q49AM3 519 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 MPZL3Q6UWV2 235 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 CEP128Q6ZU80 1094 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 ANKS1BQ7Z6G8 1248 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 CCDC25Q86WR0 208 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 RNF149Q8NC42 400 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 CCHCR1Q8TD31 782 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 FAXDC2Q96IV6 333 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 CCDC114Q96M63 670 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 ZNF317Q96PQ6 595 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 SLITRK1Q96PX8 696 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 TCHPQ9BT92 498 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 DDX23Q9BUQ8 820 aaKnown RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 ASCC2Q9H1I8 757 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-208ENST00000544327 FZD8Q9H461 694 aa18.78■□□□□ 0.6
SCARB1-208ENST00000544327 ANK1P16157 1881 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 ADCY8P40145 1251 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 IREB2P48200 963 aaKnown RBP18.77■□□□□ 0.6
SCARB1-208ENST00000544327 ZNF252P-AS1Q0IIN9 211 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 TFDP1Q14186 410 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 SEC16BQ96JE7 1060 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 SELENOSQ9BQE4 189 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 HEMGNQ9BXL5 484 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 XYLT2Q9H1B5 865 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 USTQ9Y2C2 406 aa18.77■□□□□ 0.6
SCARB1-208ENST00000544327 SRGAP2CP0DJJ0 459 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 CD58P19256 250 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 ATP5DP30049 168 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 SSTR3P32745 418 aaPredicted RBP18.77■□□□□ 0.59
SCARB1-208ENST00000544327 LIG3P49916 1009 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 RPL7AP62424 266 aaKnown RBP18.77■□□□□ 0.59
SCARB1-208ENST00000544327 TRPC3Q13507 836 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 PIGHQ14442 188 aaPredicted RBP18.77■□□□□ 0.59
SCARB1-208ENST00000544327 HSDL1Q3SXM5 330 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 DNAJC24Q6P3W2 148 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 ERO1BQ86YB8 467 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 MICALL1Q8N3F8 863 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 ADARB2Q9NS39 739 aaKnown RBP18.77■□□□□ 0.59
SCARB1-208ENST00000544327 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.59
SCARB1-208ENST00000544327 SMIM23A6NLE4 172 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 LIASO43766 372 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 GJB6O95452 261 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 TNNC2P02585 160 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 BRD2P25440 801 aaKnown RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 ASPAP45381 313 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 HIBCHQ6NVY1 386 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 CACNA2D3Q8IZS8 1091 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 WDTC1Q8N5D0 677 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 NLGN2Q8NFZ4 835 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 UHMK1Q8TAS1 419 aaKnown RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 P3H4Q92791 437 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 NFKBIZQ9BYH8 718 aa18.76■□□□□ 0.59
SCARB1-208ENST00000544327 DDX56Q9NY93 547 aaKnown RBP18.76■□□□□ 0.59
SCARB1-208ENST00000544327 KCNH4Q9UQ05 1017 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms