RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SLC43A3Q8NBI5 491 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 GOLGA1Q92805 767 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 SDCBP2Q9H190 292 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 ERVK-5Q9HDB9 667 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 OSGEPQ9NPF4 335 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 TUBGCP4Q9UGJ1 667 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 STXBP5LQ9Y2K9 1186 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 PTCH2Q9Y6C5 1203 aa9.95□□□□□ -0.82
GNE-206ENST00000543356 CD4P01730 458 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 WEE2P0C1S8 567 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CYP3A5P20815 502 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 AKAP5P24588 427 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TNNC1P63316 161 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 NOMO3P69849 1222 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 INCA1Q0VD86 236 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 ARRDC4Q8NCT1 418 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 ZNF606Q8WXB4 792 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 ZNF653Q96CK0 615 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CXCL16Q9H2A7 254 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 SMYD3Q9H7B4 428 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 UVRAGQ9P2Y5 699 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 PCDHGC3Q9UN70 934 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 COG5Q9UP83 839 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 PHF24Q9UPV7 400 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 SQORQ9Y6N5 450 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 MYH10P35580 1976 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 A0A1W2PQ45 241 aaPredicted RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 A0A1W2PQY0 241 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CTAGE15A4D2H0 777 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 SRGAP2O75044 1071 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CILPO75339 1184 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CTAGE8P0CG41 777 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 NSFP46459 744 aaKnown RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 RAP1GAPP47736 663 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 FBXO47Q5MNV8 452 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 MON1BQ7L1V2 547 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 CTAGE6Q86UF2 777 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 PHF13Q86YI8 300 aaPredicted RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 CTAGE4Q8IX94 777 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 MCOLN2Q8IZK6 566 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TMEM130Q8N3G9 435 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 UBXN4Q92575 508 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 VCPIP1Q96JH7 1222 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TRAIPQ9BWF2 469 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 APOL6Q9BWW8 343 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.94□□□□□ -0.82
GNE-206ENST00000543356 TRMT13Q9NUP7 481 aaKnown RBP9.94□□□□□ -0.82
GNE-206ENST00000543356 CTTNBP2NLQ9P2B4 639 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TRIM17Q9Y577 477 aa9.94□□□□□ -0.82
GNE-206ENST00000543356 TRIP11Q15643 1979 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 SMIM28A0A1B0GU29 152 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 BUB1BO60566 1050 aaPredicted RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 KIF4AO95239 1232 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ATF7P17544 494 aaPredicted RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 CDH5P33151 784 aaPredicted RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 RAD23BP54727 409 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 RPS6KA1Q15418 735 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 NAA35Q5VZE5 725 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 C9orf57Q5W0N0 161 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 PEX26Q7Z412 305 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 DAAM2Q86T65 1068 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 NT5DC3Q86UY8 548 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 CREG2Q8IUH2 290 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 C18orf25Q96B23 403 aaPredicted RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 CYFIP2Q96F07 1278 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ZNF518BQ9C0D4 1074 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 RNF39Q9H2S5 420 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 FAM105AQ9NUU6 356 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 PARP2Q9UGN5 583 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 PIRO00625 290 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 MED7O43513 233 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 TFRCP02786 760 aaKnown RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 PNPLA4P41247 253 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 RAB27AP51159 221 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ITIH3Q06033 890 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 C1QBPQ07021 282 aaKnown RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 PAK2Q13177 524 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 LPIN1Q14693 890 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ELF2Q15723 593 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 GLRA4Q5JXX5 417 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 RABGGTAQ92696 567 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 ZNF560Q96MR9 790 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 NUP85Q9BW27 656 aa9.93□□□□□ -0.82
GNE-206ENST00000543356 AGO3Q9H9G7 860 aaKnown RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 CNOT8Q9UFF9 292 aaKnown RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
GNE-206ENST00000543356 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
GNE-206ENST00000543356 ZNF185O15231 689 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms