RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CTXN3Q4LDR2 81 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 CMASQ8NFW8 434 aaPredicted RBP19.8■□□□□ 0.76
COPS7A-216ENST00000543170 ZNF516Q92618 1163 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 RHOBTB2Q9BYZ6 727 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 MAN1C1Q9NR34 630 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 FBXL5Q9UKA1 691 aa19.8■□□□□ 0.76
COPS7A-216ENST00000543170 GRXCR2A6NFK2 248 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 OR6C75A6NL08 312 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 CYB561D2O14569 222 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 ADAM12O43184 909 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 MBTPS2O43462 519 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 OR1D2P34982 312 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 KCNQ1P51787 676 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 ROR1Q01973 937 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 PAK1Q13153 545 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 OVOS1Q6IE37 1185 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 PTCRAQ6ISU1 281 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-216ENST00000543170 TTI2Q6NXR4 508 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 RSPO2Q6UXX9 243 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-216ENST00000543170 RTL10Q7L3V2 364 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 GLYCTKQ8IVS8 523 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 NELFBQ8WX92 580 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 CEP63Q96MT8 703 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 S1PR5Q9H228 398 aa19.79■□□□□ 0.76
COPS7A-216ENST00000543170 C4BPAP04003 597 aaKnown RBP19.78■□□□□ 0.76
COPS7A-216ENST00000543170 BMP1P13497 986 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 ATICP31939 592 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 DLG4P78352 724 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 SMAD2Q15796 467 aaKnown RBP19.78■□□□□ 0.76
COPS7A-216ENST00000543170 ZACNQ401N2 412 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 C1orf220Q5T0J3 134 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 TDRD10Q5VZ19 366 aaKnown RBP19.78■□□□□ 0.76
COPS7A-216ENST00000543170 KLHL10Q6JEL2 608 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 CYP26C1Q6V0L0 522 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 C15orf39Q6ZRI6 1047 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 RBM43Q6ZSC3 357 aaKnown RBP19.78■□□□□ 0.76
COPS7A-216ENST00000543170 DPH6Q7L8W6 267 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 METTL23Q86XA0 190 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 PALB2Q86YC2 1186 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 TMEM86AQ8N2M4 240 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 TOP6BLQ8N6T0 577 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 MLKLQ8NB16 471 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 SUSD6Q92537 303 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 HPDLQ96IR7 371 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 VRTNQ9H8Y1 702 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 ZDHHC7Q9NXF8 308 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 MAFFQ9ULX9 164 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 CTNND2Q9UQB3 1225 aa19.78■□□□□ 0.76
COPS7A-216ENST00000543170 TIMM13Q9Y5L4 95 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-216ENST00000543170 WDR27A2RRH5 827 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 ABLIM3O94929 683 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 HOXA9P31269 272 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 GTF2H1P32780 548 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 CLUL1Q15846 466 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 TPGS2Q68CL5 300 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 SCARA3Q6AZY7 606 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 LIMS2Q7Z4I7 341 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 KREMEN2Q8NCW0 462 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 ZNF461Q8TAF7 563 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 SYAP1Q96A49 352 aaPredicted RBP19.77■□□□□ 0.76
COPS7A-216ENST00000543170 DUSP9Q99956 384 aaKnown RBP19.77■□□□□ 0.76
COPS7A-216ENST00000543170 ADAM7Q9H2U9 754 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.76
COPS7A-216ENST00000543170 DENND4AQ7Z401 1863 aa19.77■□□□□ 0.76
COPS7A-216ENST00000543170 C2orf16Q68DN1 1984 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 HUS1O60921 280 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-216ENST00000543170 POU2F2P09086 479 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 BIRC3Q13489 604 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 TRPC3Q13507 836 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 LIN9Q5TKA1 542 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 WSCD1Q658N2 575 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 CES5AQ6NT32 575 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 SV2AQ7L0J3 742 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 FILIP1Q7Z7B0 1213 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 PDCL2Q8N4E4 241 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 NECTIN4Q96NY8 510 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 XYLT2Q9H1B5 865 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 RWDD2AQ9UIY3 292 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 L1RE1Q9UN81 338 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 SNX9Q9Y5X1 595 aa19.76■□□□□ 0.75
COPS7A-216ENST00000543170 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 STX10O60499 249 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 PHACTR2O75167 634 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 ZMYND10O75800 440 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 FAM163BP0C2L3 166 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 IL9P15248 144 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 ATF2P15336 505 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 NCOA4Q13772 614 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 UVSSAQ2YD98 709 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 RARS2Q5T160 578 aaKnown RBP19.75■□□□□ 0.75
COPS7A-216ENST00000543170 CCDC149Q6ZUS6 474 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 THEM5Q8N1Q8 247 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 EEF2KMTQ96G04 330 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 METTL14Q9HCE5 456 aaKnown RBP19.75■□□□□ 0.75
COPS7A-216ENST00000543170 TMEM8AQ9HCN3 771 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 PRKAG3Q9UGI9 489 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 AFF4Q9UHB7 1163 aaKnown RBP19.75■□□□□ 0.75
COPS7A-216ENST00000543170 DACH1Q9UI36 760 aa19.75■□□□□ 0.75
COPS7A-216ENST00000543170 TCF20Q9UGU0 1960 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms